Rhizobium indicum: FFM53_013190
Help
Entry
FFM53_013190 CDS
T07009
Symbol
addB
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
rii
Rhizobium indicum
Brite
KEGG Orthology (KO) [BR:
rii00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rii03400
]
FFM53_013190 (addB)
Enzymes [BR:
rii01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FFM53_013190 (addB)
DNA repair and recombination proteins [BR:
rii03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
FFM53_013190 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
QKK17317
LinkDB
All DBs
Position
2656145..2659336
Genome browser
AA seq
1063 aa
AA seq
DB search
MAERHQPRILTIPAGLSFLKTLATTVCDGRLTPIFRHDVDDPLSLAKVTIYLPTRRAVRV
LRSEFVDLLGGRSAILPVIRPLGETDDDSGYFDEALPTTIDLAQPLSNTARLLELARLIL
AWRNKLPEIVRHIHSDSPLVAPASPADAIWLARNLAELIDSIETEDLDWSELSKLDTGDY
AAWWQLTAEFLQIASAFWPERLSELGKSSPARHRNAILRAEAGRLSATKPAGPIIIAGST
GSVPATADLIAAVAHLPEGVIVLPGLDLSMPEMHWQMVAPEPAPGQHANPASRSHPQYGL
SLLLKRLKLTRADVTLLDRPEADLDRRAEILSRALAPAEATSDWGAWKSDLPAGALSSAF
SDVSLIEAANEREEATAIAIALRLALERPGQDGESRAALITPDRNLARRVMAELSRFGIL
ADDSAGTPLSAMPQGTLLQLLLEAALRPGDPVAIISLLKHPLARFGLERGALISATEALE
LLALRGGVAEVDISTLEPLLTHQLAEQALDRHAPQWRKSLSPEAADAACDLARRVTQATE
PLASALMRHRPEDRGRTVRFTLSEWAERTGRSLEAVAVDPQGNLADLWSNEAGDALAALL
SEVIDTDGQMEADGPQWIDIMAALAAGHAVKPRALSHPRLFIFGTLEARLQSVDTLILGG
LNEGTWPGQTANNPFIPRMMKTEIGLEPPERRIGQLAHDFEMANGTRHLIYSRALRQGST
PTVASRWLQRLLALGGEAFEAELKGRGNRFLQWAALIDRGDAQAPVQRPSPKPPLALQPK
SYSFSEVGRLRRDPYAIYARRILRLDPVDPFNRDPGAAERGTLYHEIIDRFIREAHIAGT
PDAAAAMEAILSELFDMEKLPPHIDAVWRPRFRAVARVFLEWEAGRQHGILKTLTEVRGG
MELEPINIRLTGVADRIDVTGPNSADIIDYKTGYNPSPAQARVLLDPQLALEAAALSAGA
FRDAGSLVPQDLLYVRLRPGSRFQVDTVNNESSARSDKAKSAMDLAAESIDQLVKFVGLL
QSSERGFTSRLIPAQQFDFGGDYDHLARVSEWSTAETEEGGDE
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcggcaccagccacgcatcctgacgatcccggcgggcctctccttcctgaaa
acgctggcgacgacagtttgcgacggccgattgacgccgattttccggcacgacgtcgat
gatccgctgtcgcttgccaaagtcacgatctacctgccgacccggcgcgccgtgcgtgtg
ctgcgttctgaattcgtcgacctgctcggcggccgatcagcgatcctccccgtcatccgc
ccgctcggcgaaaccgatgacgatagcggctatttcgacgaggcgctgccgacaacgatc
gatctcgcccagccgctatcgaataccgcccgtctgctggagcttgcgcgtctgatcctt
gcctggcgaaataagttgccggagatcgtccgccacattcactcggactcgccgctcgtc
gcgccggcaagcccggcggatgcgatctggctcgcccgcaatcttgccgagctgatcgat
tccatcgagaccgaggatctcgactggtcggagctgtcgaaactcgataccggcgattat
gccgcctggtggcagttgacggcggagttcctgcagatcgccagcgccttctggcccgaa
cggctttccgaactcggcaaatcctcgccggcacggcatagaaacgccattctgcgggcc
gaagcaggccggctttcggcgacgaaacccgcgggaccgatcatcatcgccggttcgacg
ggttccgttcccgccaccgccgatctcatcgccgccgtcgcccatctgcctgaaggtgtg
atcgtgcttccaggtctcgatctctccatgcccgaaatgcactggcagatggtcgcgccg
gaaccggcgcccggccaacatgccaatcccgcaagccggagccatccgcaatatggcctg
tcactgctgctcaagcggctgaagctgacacgcgccgacgtcacgctcctcgacagaccg
gaggccgatcttgaccggcgggccgaaatcctgtcgcgggcccttgctccagcggaggcg
accagcgactggggagcgtggaagagcgatctgccggccggcgcgctgtcttcggccttc
tctgatgtctcgctgattgaagccgccaatgagcgcgaggaagcaacggcgattgccatc
gcactccggctggcgctggaaagaccgggacaggacggcgagagccgggcagcactcatc
actccggaccgcaatctcgcgcggcgggtgatggccgagctttcccgcttcggcattctc
gccgatgattcggcgggcacaccgctttcggccatgccgcagggcaccttgctgcaattg
ctgctggaggcagcgctgcgaccgggcgatccggtggcaatcatctcactgctcaaacat
ccgcttgcccgcttcggcctggagcgcggcgcattgatttccgctaccgaggcgctcgag
ctgctggcgctgcgcggcggtgtggccgaggtggatatcagcacgctcgaacctctcctc
acgcaccaacttgccgaacaggcgctggacaggcacgcgccgcaatggcgaaaatcgctt
tcgcctgaggccgccgacgccgcatgcgaccttgcccgccgggtcacacaagcgaccgag
cctctggcttcggcgctgatgcggcaccggccggaagatcgtggaagaacagtgcgcttc
acattgtccgaatgggccgagcgcactggccgttcgcttgaagcggtcgcggtcgatccg
caaggcaatctcgccgatctctggtcgaacgaagcgggagacgccctcgccgccctgctc
agtgaagtgatcgacacggacggccagatggaggccgacggaccgcaatggatcgacatc
atggcagcgctcgccgccggtcatgcggtgaaaccacgggcgctcagccatccgaggctc
ttcatcttcggcacgctggaagcccgcctgcagagcgtcgatacgctgatcctcggcggc
ctgaacgaaggcacctggccgggacagaccgccaacaaccccttcattccgcgaatgatg
aagacggagatcggcctcgagccgccggagcggcgcatcggccagctggcgcatgatttc
gagatggcaaacggcacacgccatctgatctattcgcgcgcgctgcgccagggctcgacg
ccgaccgtcgcctcgcgttggctgcagcggctgctggcgctcggcggagaggcgttcgaa
gcggaattgaagggacgcggcaatcggttcctccaatgggccgctctcatcgatcgggga
gatgctcaggcgccggtgcagcgcccctcgccgaaaccgccgctggcgctgcagccgaaa
tcctattccttcagcgaagtcggccggctgcgccgagatccctatgccatctatgcccgt
cgcatcctgcggcttgaccccgtcgacccgttcaatcgtgatccaggggcggccgaacgc
ggaacgctctaccacgagatcatcgatcgattcatccgcgaggctcacatcgccggcacg
ccggatgcggcagcggcgatggaggccatcctttccgagcttttcgacatggaaaagttg
ccgccgcatatcgacgcggtgtggcggccgcgctttcgcgcggtggcccgcgtcttcctc
gaatgggaggccggacgccagcatggcatcctgaaaacgctgacggaagtacggggcggc
atggaattggagccgatcaatatccggctcaccggcgttgcagaccggatcgacgtcaca
ggaccaaactcggccgacatcatcgactacaagaccggctacaatccctcaccggcgcag
gcacgtgtgcttctcgatccgcagcttgcgcttgaagcggccgccttgagcgccggtgcc
ttccgcgatgccggcagcctcgtgccgcaggaccttctctatgtgcgtctgcgacccgga
agccgcttccaagtcgataccgtcaacaacgagagctcggcgcgcagcgacaaggcgaaa
tcggcgatggatctggccgccgaatcgatcgaccagctggtcaaattcgtggggttgctg
caatccagcgagagaggctttacctcgcggctgatcccggcccagcaattcgatttcggc
ggcgactatgatcatctcgcccgcgtctccgaatggtcgacggccgaaaccgaagagggc
ggcgatgagtga
DBGET
integrated database retrieval system
