Rhizobium indicum: FFM53_013300
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Entry
FFM53_013300 CDS
T07009
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
rii
Rhizobium indicum
Pathway
rii03030
DNA replication
rii03430
Mismatch repair
rii03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rii00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FFM53_013300 (dnaQ)
03430 Mismatch repair
FFM53_013300 (dnaQ)
03440 Homologous recombination
FFM53_013300 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rii03032
]
FFM53_013300 (dnaQ)
03400 DNA repair and recombination proteins [BR:
rii03400
]
FFM53_013300 (dnaQ)
Enzymes [BR:
rii01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FFM53_013300 (dnaQ)
DNA replication proteins [BR:
rii03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FFM53_013300 (dnaQ)
DNA repair and recombination proteins [BR:
rii03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FFM53_013300 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
QKK17339
UniProt:
A0ABX6PG80
LinkDB
All DBs
Position
complement(2681358..2682080)
Genome browser
AA seq
240 aa
AA seq
DB search
MREIIFDTETTGLDNRADRIIEIGGIELFNHFPTGNTIHIFINPGDQKVHPDALAVHGIT
DEFLKDKQPFAEVAEQILTFFGDAKWIAHNATFDMGFINAEFARIGLPPILPERVLDTLS
MARRKHPMGPNSLDALCRRYGIDNSHRTKHGALLDSELLAEVYIEMIGGRQAAFGLSISG
TSGQARHGETAMEDDVVVAAVLERPRPLAPRISLSEEQAHEALVAKLGEKSVWAKYANLD
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgagatcatcttcgatacggaaacaaccggcctcgacaaccgcgccgaccgcatc
atcgaaatcggcggcatcgagctcttcaatcatttccccaccggcaacacgatccatatc
ttcatcaatcctggagatcagaaggttcatccggatgcgctcgccgtgcacggcatcacc
gatgaattcctgaaggacaagcagcctttcgccgaggttgccgaacaaatcctcaccttc
ttcggcgatgcgaagtggattgcccataacgccaccttcgatatgggcttcatcaacgct
gagttcgcgcggatcggtttaccgccaatcctgccggaacgggtgctcgacacgctgtcg
atggcgcggcgcaaacatccgatggggccgaattcgctcgatgcgctttgccggcgctac
ggcatcgataattcgcaccgcaccaaacacggcgcgctgctcgactccgaactgcttgcc
gaagtttatatcgagatgatcggcggcaggcaggcggcctttggcctgagcatatcagga
acgtcgggccaggctcgccacggcgaaacggcaatggaagacgatgtggtggttgccgca
gtgcttgagcggccccgcccactcgccccgcgcatcagcctatccgaggagcaggcgcat
gaggcgctcgtcgccaagctcggtgaaaaaagcgtctgggcgaaatacgccaatctcgat
taa
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