Rhizobium indicum: FFM53_013905
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Entry
FFM53_013905 CDS
T07009
Name
(GenBank) helicase
KO
K17675
ATP-dependent RNA helicase SUPV3L1/SUV3 [EC:
5.6.2.6
]
Organism
rii
Rhizobium indicum
Brite
KEGG Orthology (KO) [BR:
rii00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
rii03029
]
FFM53_013905
Enzymes [BR:
rii01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
FFM53_013905
Mitochondrial biogenesis [BR:
rii03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
FFM53_013905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEXQc_Suv3
Helicase_C
Motif
Other DBs
NCBI-ProteinID:
QKK17454
LinkDB
All DBs
Position
2825420..2828656
Genome browser
AA seq
1078 aa
AA seq
DB search
MTLISQPMILSGRGVTAVLGPTNTGKTHYAIERMVAHGTGVIGLPLRLLAREVYTRVVEK
VGAQNVALVTGEEKISPPNARFSVCTVEAMPRETKAAFVAIDEVQLAGDLERGHIFTDRI
LHLRGREETLLLGAATMRPILQQLLPGITIVERPRLSHLFYAGQKKITRLPQRSAIVAFS
ADEVYAIAELIRRQRGGAAVVLGALSPRTRNAQVALYKAGDVEYLVATDAIGMGLNLDVD
HVAFAQDRKFDGYQFRNLNPGELGQVAGRAGRHVRDGTFGVTGQVSPFDDELVQRIEGHE
FDNVKVLQWRTTEMDFSSIASLRASLEVGPRVPGLTRALPAVDQQALEQLSRYPEVIDLA
DRPARVEKLWEACALPDYRRITPAQHADLISTLFSDLVRYGTVNEQFLAEQVHRSDRTDG
EIDTLSARIAQIRTWTYVSNRPGWLADPTHWQEKTREIEDRLSDALHERLTKRFVDRRTS
VLMKRLRENAMLEAEISVNGDVFVEGHHVGQLSGFRFTPVAGTDGPDAKAVQAASQKALG
LEFEARAARMHAAGNSDLVIGSDGLIRWLGDPVARLSGSDHIMRPRVILLADEQLTGNAR
DHVAARIERFVNHHISTVLKPLDDLSRAEDLQGLAKGLAFQLVENLGVLFRRDVTEEVKS
LDQEARASMRRYGVRFGAYHIFVPALLKPAPAELITLLWALKNDGLDKPGYGDLIPVLAA
GRTSVVTDPTFERMFYKLAGFRFLGKRAVRIDILERLADIIRPLLQWKPGQNNRPEGAYD
GRRFTTTTAMLSILGATLEDMEEILKGLGYRADAVKAEEASLHLAAQDVASVPAASAQTP
AEETAEKADHDDADGAAEETAAEPSATEAASAVAHAPVTEAVETPAPAEPIETSAPAEAV
SASEEAGSAPGEAGEPTEPKPVLLWRLGGRNDNQRQARGGHGERRGGQGQERGQNQERGD
RNRRPGGGEGGEGNRNGDGRDNNRQNRGKEGGGRDGGRPQQARGDRNNQPRGDQPRGDRQ
DRGDRKDRGERNDRNDRNNNRGGSQPLRFEAKPPRKEKPIDPDSPFAKLAALKEQMKK
NT seq
3237 nt
NT seq
+upstream
nt +downstream
nt
atgactctgatttcgcagccgatgattctgagcgggcgcggtgtgaccgcggtgctcggg
ccgaccaataccggcaagacccattatgccatcgagcgcatggttgcgcacgggacgggc
gtgatcggcctgccacttcggcttctggcccgcgaggtctatacgcgggtggtagagaag
gtcggcgcgcagaatgtggcgctggtcaccggcgaggaaaagatttcgccgcccaatgcg
cgtttttccgtctgcactgtcgaagcgatgccgcgcgagaccaaggctgccttcgtcgcg
atcgacgaggtgcagctcgccggcgatctcgaacgcggccatatcttcaccgaccgcatc
ctgcatcttcgcggccgcgaggaaacgctgctgctcggcgcggcaacgatgcggccgatc
ctgcagcagctcctgcccggcatcactatcgtcgagcggccacggctttcgcatcttttc
tacgccgggcagaagaagatcacacggctgccgcagcgctcggccatcgtcgccttctcc
gctgacgaggtctacgccatcgccgagcttattcgccggcagcgcggtggcgcggcggtc
gtgctcggcgcgctcagcccacgcacccgcaatgcgcaggtggcgctctataaggcgggc
gacgtcgaatatctggtggcgaccgatgcgatcggcatgggcctcaacctcgatgtcgat
cacgtcgcctttgcccaggaccggaaattcgacggctaccagttccgcaatctcaatccg
ggcgaactcggccaggtcgccgggcgcgccggacggcatgtgcgggacgggaccttcggc
gtcaccgggcaagtctcgcccttcgatgacgaactggtgcagcgcatcgaggggcacgaa
ttcgacaacgtcaaggttttgcagtggcggacgacggagatggacttctcctcaatcgca
tcgctgcgcgccagccttgaggtgggaccgcgcgtgccggggctgacgcgggcattgcct
gcggtcgaccagcaggcgctggaacagctttcgcgctatcccgaggtcatcgatcttgcc
gacaggccggcgcgcgtcgaaaaactctgggaggcttgcgcgcttcccgattatcggcgt
atcaccccagcacaacatgccgatcttatctcgaccctcttttccgatcttgtccgctat
ggcacggtgaatgagcagtttcttgcggagcaggttcatcgctccgatcgaacagatggg
gaaattgacacgctttcggcgcgaatcgcgcagataaggacctggacctacgtttcgaat
cggcccggttggcttgccgatccgacacactggcaggaaaagacgcgggaaatcgaagat
cgattgtccgacgcgttacatgaaaggttgacgaaacgctttgttgatcgcaggacatct
gtgctcatgaagcgcctgagagagaatgcgatgctggaagctgaaatcagtgtgaatggc
gatgtcttcgttgaaggacatcatgtagggcaattgagcgggttccgtttcacgccggtg
gcgggaacggacggaccggatgccaaggcggttcaggctgcgtcgcagaaggcgctcggg
ctcgagttcgaagcccgcgcggcccggatgcatgccgccggcaacagcgatctggtgatc
ggttcggatgggttgatccgttggctgggcgacccggtggcgcggctttcgggcagtgat
cacatcatgcgtccgcgcgtgatcctgctggccgacgaacaactgacgggcaatgcccgc
gatcacgtcgccgcccgcatcgagcgcttcgtcaatcatcatatcagcacggtgctgaag
ccgctcgatgatctgtcgcgcgccgaggatctgcagggccttgccaaagggcttgccttc
cagctcgtcgagaatctcggggtgctcttccgccgcgacgtgaccgaagaggtgaagtcg
ctggaccaggaggcccgtgcctccatgcgccgctacggcgtgcgtttcggcgcctatcat
atcttcgttcccgcacttctgaagccggcgccggccgagctcatcacgctgctctgggcg
ctgaagaacgacggtctcgacaagcccggctacggtgatctcattccggtgcttgccgcc
ggccgcacctccgtcgtcacggatccgaccttcgagcggatgttctacaagctcgccggc
ttccgtttcctcggcaagcgagccgtacgcatcgacatcctggaacggctggccgatatc
atccgtccgctgctgcaatggaagcccggccaaaacaaccgtccggagggcgcctatgat
ggccgccgcttcacgacgacgacggcgatgctgtcgatcctcggtgcgacgctcgaggac
atggaagaaatcctcaagggtctcggctatcgcgccgatgccgtgaaggcggaagaggca
tcactacatcttgcagcgcaggatgtggcctcggtgcctgccgccagcgcacaaacgcct
gcggaagagacagccgagaaggccgatcacgacgatgccgatggcgctgcggaagagact
gctgccgagccatccgcaaccgaggcggcttcggcggtcgcccacgcgccggtgacggaa
gcggtcgaaactcccgctccggccgaaccgatcgagacatccgctcctgcggaagcggta
tcggcttccgaggaagcaggatctgctcctggggaagccggcgagccgacggaaccgaag
ccggttcttctgtggcgtcttggcggtcgcaacgacaatcagcgccaggcgcgcggcggg
catggcgaacgccgtggcggccagggccaggagcgcggtcaaaaccaggagcgcggcgac
cgcaatcgccggccgggcggcggtgaaggcggcgagggcaatcgcaatggcgacggccgc
gacaacaatcgccagaaccgtggcaaggaaggcggcggtcgcgatggtggccggccgcag
caggcaagaggcgaccgcaataaccaaccacggggcgaccagccgcgcggtgaccggcag
gaccgtggcgatcgcaaggatcgcggcgagcgtaacgatcgcaacgaccgcaacaacaat
cgtggcggctcgcagccgttgcgcttcgaggccaagccgccgcgcaaggagaagccgatc
gatccggattcgcctttcgccaagctcgctgctctcaaggagcagatgaagaagtaa
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