Rhizobium indicum: FFM53_014950
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Entry
FFM53_014950 CDS
T07009
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
rii
Rhizobium indicum
Pathway
rii03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rii00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
FFM53_014950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rii03400
]
FFM53_014950
Enzymes [BR:
rii01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FFM53_014950
DNA repair and recombination proteins [BR:
rii03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FFM53_014950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Zn_ribbon_PriA
Helicase_C
Zn_ribbon_6
AAA_30
AAA_22
Zn_ribbon_Com
Motif
Other DBs
NCBI-ProteinID:
QKK17654
UniProt:
A0ABX6PH45
LinkDB
All DBs
Position
3047868..3050084
Genome browser
AA seq
738 aa
AA seq
DB search
MSTDSSDLFGALFEAPPANRTVPVLVPMPAPKPYSYSVPDGMAVEPGSVVQVPLGPRQVI
GVVWDGGEDGVDPKKLRPISHVFDCPPLSREMRDFIDWVATYTLSPPGLVARMALRAPNA
FEPEPMVEGLKLVGGEPERMTPARARVLDTASDGFSWTRSGLAHAAGVSTSVVDGLITLG
IFETVFLPPPPVVAMPDPDFAAARLEGPQKQAAEEIVSDVRKGEFSVSLIDGVTGSGKTE
VYFEAIAETLKRGKQVLILLPEIALTASFMERFQDRFGAKPAEWHSDLAPRMREKVWRQA
VTGEVRVVAGARSALFLPFEDLGLIIVDEEHDPAYKQEDRVFYNARDMAVVRGRIGDFSV
ILVSATPSVESQVNGQSGRYSTVHLPTRFGDAAMPDLHLVDMRRHAPERGGFLSPVLIRA
IGKTVEKREQALLFLNRRGYAPLTLCRVCGHRFQCPQCSSWLVEHRFRKQLQCHQCGHAE
RTPEACPECGTLDHLVACGPGVERIAEEVERHFPEARTIVLSSDIMGGVKRLRLELEAIA
KGEADIVIGTQLVAKGHNFPLMTLVGIVDADLGLANGDPRAAERTFQLLSQVTGRAGRTG
LKSHGLLQTYQPQHPVMQAIVSGDSDAFYEREITERERALLPPFGRLASIIVSAETRHDA
ENHARGMRNAAPQVSGISVLGPAEAPLALVRGRHRFRLLVHGRRNSDMQGFLRAMLSQSP
KERGSVQVQLDIDPQSFL
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgagcacagattcgtccgatctctttggcgcgcttttcgaggcaccgcccgcgaaccga
acggttcccgtgctggtgccgatgccggcgccgaaaccctattcctattcggtgccggat
ggcatggcggtcgagcccggttcggtcgtgcaggtgccgcttggcccgcggcaggtgatc
ggcgtcgtctgggacggcggcgaagacggcgtcgatccgaagaagcttcggccgatcagc
catgtcttcgactgcccgccgctttccagggagatgcgggacttcatcgattgggtggcg
acctatacgctctcgccgcccggcctcgtcgcgcgcatggcgctccgggcgccgaacgcc
ttcgagccggaaccgatggtggaggggctgaagctcgtcggcggcgaaccggagcggatg
acgccggcgcgcgcccgggtgctcgatacggcctccgacggcttttcctggacacgcagc
ggccttgcgcatgcggcgggtgtctcgacgagtgtcgtagacgggctgatcacgctcggc
atcttcgagactgtattcctgccgccgccgccggttgtcgcgatgccggatccggatttt
gccgcagcacgtctcgaagggccgcagaagcaggcggccgaagagatcgtttccgatgtc
cgcaagggcgaattttcggtgtcgctgatcgacggggtaaccggctccggcaagacggag
gtctatttcgaggcgattgccgagacgctgaaacgcggcaagcaggtgctgatcctgctg
ccggagatcgcgctgacggccagtttcatggagcgtttccaggaccgcttcggggcaaag
ccggccgaatggcattccgatcttgcgccgcgcatgcgcgaaaaggtctggcgccaggcg
gtgaccggcgaagtgcgggtggtggccggcgctcgctcggcgctcttcctgcccttcgag
gatctcggcctgatcatcgtcgacgaggaacacgatcccgcctacaagcaggaggatcgc
gtgttctacaatgctcgcgacatggccgtcgtgcgcggccgcatcggtgatttttccgtt
attctggtgtcggcgacgccgtcggtcgaaagccaggtcaacggccagagcggacgctac
agcaccgtccacctgccgacgcgtttcggcgatgcggcgatgccggacctgcatctggtc
gatatgcgcaggcatgcgccggagcggggcggcttcctgtcgcctgtgctgatccgggcg
atcggcaagacggtggagaagcgcgaacaggcgctgctgtttctcaaccggcgcggttat
gcgccgctgacgctctgccgggtctgcggccaccggttccaatgcccgcaatgttcgagc
tggctggtggagcatcgtttccgcaagcagctgcaatgccatcaatgcggccatgccgag
cgcacgccggaggcatgcccggaatgcggcacgctcgaccatctcgtcgcctgcgggcca
ggcgtcgagcgcatcgccgaggaggtggaacggcatttcccggaggcgcgaacgatcgtt
ctctcttccgatatcatgggcggggtgaagcggctgcggctggagctggaagcgatcgcc
aagggcgaggccgatatcgttatcggcacccagcttgtggcaaagggccacaattttccg
ctgatgacgctggtcggcatcgtcgatgccgatctcggccttgccaatggcgacccgcgc
gcggccgagcgcaccttccagcttttgtcgcaggtgaccggccgggccgggcgcaccggc
ctcaagagccatgggctgctgcagacctaccagccgcagcatcctgtcatgcaggcaatt
gtctccggcgattccgacgccttctacgagcgcgagatcaccgaacgcgaacgcgcccta
ttgccgcccttcggcaggctggcgtcgatcatcgtttctgccgaaacccgccacgacgcc
gaaaaccatgcgcgcggcatgcgcaacgccgcaccgcaggtgtcaggcatctcggtgctc
ggtccggccgaagcgccgcttgcgctggtgcgcggccgccatcgcttccgtcttttggtg
catgggcggcggaactcggacatgcaggggttcctgcgggcgatgctgtcgcaatcgccc
aaggagcgcggatcggtgcaggtgcaactggatatcgatccgcagagttttctctaa
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