Rhizobium indicum: FFM53_015425
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Entry
FFM53_015425 CDS
T07009
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
rii
Rhizobium indicum
Pathway
rii00300
Lysine biosynthesis
rii00470
D-Amino acid metabolism
rii01100
Metabolic pathways
rii01110
Biosynthesis of secondary metabolites
rii01120
Microbial metabolism in diverse environments
rii01230
Biosynthesis of amino acids
Module
rii_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rii00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
FFM53_015425 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
FFM53_015425 (lysA)
Enzymes [BR:
rii01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
FFM53_015425 (lysA)
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Paralog
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
QKK17743
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All DBs
Position
complement(3148587..3149855)
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AA seq
422 aa
AA seq
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MNHFEYRDGVLHAENVPVPEIAKAVGTPFYVYSTATLERHYRVFSEAFADMDSMVCYAMK
ANSNQAVLKTLGRLGAGIDVVSEGELRRALAADIPANRIMFSGVGKTPSEMDFALEAGIY
CFNVESEPELEILNQRAVSAGKKAPVSFRINPDVDAKTHSKISTGKKENKFGISWERARA
IYAHAAKLPGIEVTGIDMHIGSQITELQPFDDAFKLLHDLVATLRADGHTIHHVDIGGGL
GIPYKDDNNPPPLPDAYAAIVKNQLRGLNCKIITEPGRLIVGNAGILVTEVLYVKDGGEK
TFVIVDGAMNDLIRPTLYEAYHEIRPVTISAANAPRIRADVVGPVCETGDYLALDREMAM
PKPGDLVAVSSAGAYGAVQAGTYNSRLLVPEVLVRGSDFHTIRPRRTYAELISLDSVPAW
LD
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
gtgaaccatttcgagtaccgcgacggcgtccttcatgcggagaacgtccccgttcccgag
atcgccaaggcggtcggcacccctttctacgtctactccaccgcgacgctggagcgccat
taccgcgtcttttcggaagccttcgccgacatggactccatggtctgctatgcgatgaag
gcgaattcgaaccaggcggtgctgaagacgctgggccgcctcggcgccggcatcgacgtc
gtctcggagggagagctgcgccgcgcgcttgccgccgacatcccggcaaatcgcatcatg
ttctcaggtgtcggcaagaccccatccgagatggatttcgctctcgaagccggcatttac
tgtttcaacgtcgaatccgagcctgaactcgagatcctcaatcagcgcgccgtcagcgcg
ggcaagaaagcgccggtctccttccgcatcaaccctgatgtcgatgcaaagacgcattcc
aagatctcgaccggcaagaaggaaaacaagttcggcatctcctgggagcgcgcccgcgcc
atctatgcccatgccgccaagctgccgggcatcgaggtcaccggcatcgacatgcatatc
ggcagccagatcaccgaattgcagcccttcgacgacgccttcaagctgctgcacgacctt
gtcgcgacgctgcgcgccgacggccacaccatccatcacgtcgatatcggcggcggcctc
ggcatcccctacaaggacgacaacaatccgccgccgctgccggacgcctatgcggcaatc
gtcaagaaccagctgcgcggtctaaactgcaagatcatcaccgaacccggacgcctgatc
gtcggcaatgccggcatcctcgtgaccgaagtattgtatgtgaaggatggcggcgaaaaa
accttcgtcatcgtcgacggcgcgatgaacgatctcatccgcccgacgctctacgaggcc
tatcacgagatccggccggtaacgatttcggcggccaacgccccccgcatccgcgccgat
gttgtcggccccgtctgcgagactggcgactatctggcgctcgaccgcgagatggcgatg
ccgaagcccggcgacctggtggccgtcagcagcgccggcgcctatggcgcggtccaggcc
ggcacctataacagccgcctgctggtgcccgaagttctggtcaggggcagcgatttccac
acgattcgaccgcgcagaacctatgccgaactgatcagcctcgactccgttccggcctgg
ctcgactag
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