Rhizobium indicum: FFM53_016225
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Entry
FFM53_016225 CDS
T07009
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
rii
Rhizobium indicum
Pathway
rii02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rii00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
FFM53_016225
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rii02000
]
FFM53_016225
Transporters [BR:
rii02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
FFM53_016225
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
Phosphonate-bd
Ral
Motif
Other DBs
NCBI-ProteinID:
QKK17887
LinkDB
All DBs
Position
complement(3319236..3320396)
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AA seq
386 aa
AA seq
DB search
MTNLLKSCTAALACLSFATQGIAAEPLKALGKGEGAVSIVAWAGYIERGETDKNYDWVTD
FEKESGCKVSVKTAATSDEMVSLMNEGGFDLVTASGDASLRLIAGKRVQPINTDLIPSFK
TVDERLQNGPWYTVGGVHYGVPYLWGPNVLMYNTDAFKDKAPTSWNVVFEEQTLPDGKSN
KGRVQAYDGAIYIADAAMYLMAHKPDLGIKDPYELNEDQYKAALDLLRGQRKLVSRYWHD
AMIQIDDFKNEGVVASGSWPFQVNLLQADKQKIASTFPDEGVTGWADTTMLHVDSEHPNC
AYMWMEHSLKAKVQGDAAAWFGAVPSVPAACKGNELMGDSGCATNGFDHFDKIKFWKTPV
AKCTTQSECVPYHRWVSDYIGVIGGR
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgacgaatctgttgaaatcctgcacggcagcgctcgcctgcctgagcttcgcgacgcag
ggaatcgccgccgaaccgctgaaggccttgggcaagggcgaaggtgcggtcagcatcgtc
gcctgggccggctatattgaacgcggcgaaaccgacaagaactacgactgggtcaccgat
ttcgaaaaggagagcggctgcaaggtttccgtcaagaccgccgccacctcggatgaaatg
gtgtcgctgatgaacgaaggcggcttcgatctcgtcacggcatcgggcgacgcctcgctc
cgcctcatcgccggcaagcgtgtccagccgatcaacaccgatctgatcccgagcttcaag
accgtcgacgagcgcctgcagaacggcccgtggtatacggtcggcggcgtgcattacggc
gtgccctatctctgggggccgaacgtgctgatgtataataccgatgccttcaaggacaag
gcgccgaccagctggaacgtcgtcttcgaggagcagacactgcccgacggcaagtcgaac
aagggccgcgtccaggcctatgacggcgcgatctacatcgccgatgccgccatgtatctg
atggcccacaagccggatctcggcatcaaggatccctacgagctgaacgaggaccagtac
aaggccgccctcgacctgttgcgcggccagcgcaagctcgtctcccgatactggcacgat
gcaatgatccagatcgacgacttcaagaacgaaggcgtcgtcgcctccggctcctggcct
ttccaggtgaacctgctgcaggccgacaagcagaagatcgcctccactttcccggatgaa
ggcgtcaccggctgggccgacaccaccatgctgcatgtcgacagcgaacatccgaactgc
gcctatatgtggatggaacattcgctgaaggccaaggtccagggcgacgccgccgcctgg
ttcggcgccgtgccctcggttcccgccgcctgcaagggcaacgagctgatgggcgatagc
ggctgcgccaccaacggcttcgatcacttcgacaagatcaagttctggaagaccccggtc
gccaaatgcacgacacagagcgagtgcgtgccgtaccatcgctgggtgtcggattatatt
ggcgtgatcggcggacggtga
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