Rhizobium indicum: FFM53_016300
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Entry
FFM53_016300 CDS
T07009
Name
(GenBank) LacI family DNA-binding transcriptional regulator
KO
K05499
LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
Organism
rii
Rhizobium indicum
Brite
KEGG Orthology (KO) [BR:
rii00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rii03000
]
FFM53_016300
Transcription factors [BR:
rii03000
]
Prokaryotic type
Helix-turn-helix
LacI family
FFM53_016300
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
Motif
Other DBs
NCBI-ProteinID:
QKK17902
LinkDB
All DBs
Position
complement(3337222..3338253)
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AA seq
343 aa
AA seq
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MSNSTPATIEDVARIAEVSIATVSRAIHMPEKVANSTRLKVNQAIAITGYTTNAMARSLR
LGRSNMILVVAPDIGDPNFSNILVGLENEARAHGYGILIGHTQNDAQRGLEYLKFLNSNQ
AAGLILFTGILPFGHQTMTARLPPSVGVFEPVFNGGIPYVGVDDTEGARKAVDLLLAEGH
RKIAFIGDSRTRLAYTRRRMGYDAGLDAAGIPPDNRIVLEGDGTIESGRHAVEQLFMRDT
LPTAFMCVNDQTAIGVMVGLGARGYDIPRDFSVTGFDDVPQAVFISPPLTTIRQPRTAIG
KQAMALLLELLSDGRPTETEILLRPDLVVRNSVSAPSRNWSKR
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgaattccacgcccgcaaccatcgaagacgtcgcccggatcgccgaggtctccatc
gcgacggtttcccgggcaatccacatgccggaaaaggtcgccaactccacgcgcctcaag
gtcaaccaggcgatcgccatcaccggctatacgaccaacgccatggcgcgcagcctgagg
ctcggccgttccaacatgatcctcgtcgtggcgcccgatatcggcgatcccaatttctcc
aacattctcgtcgggctggagaacgaagcgcgcgcgcacggctacggcatcctgatcggc
cacacgcagaacgacgcccagcgcggtctcgaatatctgaaattcctaaattccaaccag
gctgccgggctgatcctcttcaccggcatcctgcccttcgggcatcagacgatgaccgcg
cggctgccgccgagcgtcggcgttttcgagcccgtcttcaacggcggcattccctatgtc
ggcgtcgacgataccgagggcgctcgcaaagcggtagacctgctgctggccgaagggcat
cgcaagatcgccttcatcggcgattcgcgcacccggcttgcctataccaggcgccgtatg
ggttacgatgccggtctcgatgccgccggcatcccgcccgacaacaggatcgtgctggaa
ggcgacggcacgatcgaaagcgggcggcatgcggtcgaacagcttttcatgcgcgacacg
cttccaaccgccttcatgtgcgtcaacgaccagacggcgatcggcgtcatggtcgggctc
ggcgcgcgaggctacgacattccgcgggatttctcggtgaccggtttcgacgatgtaccg
caggccgtcttcatatccccaccgctgaccacgatccgccagccgagaacggcgatcggc
aagcaggcaatggcgctgctgctggaacttctgtccgatggccggccgaccgaaacggaa
atcctgctgcggccggatctggtggttcgaaactccgtctcggcaccgtcgcgcaactgg
tcgaaacggtaa
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