Rhizobium indicum: FFM53_016465
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Entry
FFM53_016465 CDS
T07009
Name
(GenBank) TRAP transporter substrate-binding protein
KO
K11688
TRAP-type transport system periplasmic protein
Organism
rii
Rhizobium indicum
Pathway
rii02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
rii00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FFM53_016465
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rii02000
]
FFM53_016465
Transporters [BR:
rii02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
FFM53_016465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctP
UCR_Fe-S_N
Motif
Other DBs
NCBI-ProteinID:
QKK17934
LinkDB
All DBs
Position
3371120..3372226
Genome browser
AA seq
368 aa
AA seq
DB search
MDRRSFFKKAGTASAGAVAATALAAPAIAQENPKIAWRMTSSFPKSLDTIYGGAEDIAKH
VAAATDGNFTIQPFAAGEIVPGLQAVDAVAAGTVEAAHTTSYYFVGKDPTYAIGTAIPFG
LNSRLTNAWYYEGNGNKLMNEFYATQGMYALPAGNTGAQMGGWFRKEINTLDDLKGVKMR
IAGLAGRVMEKVGVIPQQIAGGDIYPALEKGTIDAAEFVGPYDDLKLGFHKVAKYYYYPG
WWEGGPTVHGFFNLEKWSSLPKHYQAALTDACAFANTNMLAKYDTKNPTALKQLVAEGAT
LRPFSQEIMEACFQAATGIYSEISGTNQYFKKIYDDQTAFKRDAYLWMQLSEYTFDTFMM
IQQRAGKL
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atggatcgtcgttcgtttttcaagaaggcgggaaccgccagcgccggtgcggttgccgca
acggcattggcagcgcctgcgatcgcgcaggagaatccgaagatcgcgtggcgcatgacg
tcgtcgtttccgaagagcttggatacgatctatggcggagccgaggatatcgccaagcat
gtcgccgccgcgacggacggcaatttcacgatccagcctttcgcggccggtgaaatcgtg
ccgggcctgcaggccgtcgatgccgttgccgccggcacggtcgaggcagcccataccacc
tcctattatttcgtcggcaaggacccgacttatgccatcggaacggccattccgttcggg
ctgaacagccgtctgaccaatgcctggtactatgaaggcaacggcaataagctgatgaac
gagttttatgccacgcagggcatgtatgccctgccggccggcaataccggtgcgcagatg
ggcggctggttccgcaaggaaatcaatacgctcgatgacctcaagggcgtcaagatgcgc
attgccggccttgccggccgcgtcatggagaaggtcggcgttatcccgcagcagatcgcc
ggcggcgacatctatccggcgttggaaaaaggcacgatcgatgcggcggaattcgtcggt
ccctatgacgacctgaagctcggcttccacaaggtggcgaagtactactattatccgggc
tggtgggaaggtggcccgacggtgcatgggttcttcaatctcgaaaagtggagcagcctg
cccaagcattatcaggcagcgctgaccgacgcctgcgccttcgccaacaccaacatgctg
gcgaagtacgacacgaagaacccaaccgcgctgaagcaactcgtcgcggagggcgcgacg
ttgcgccctttcagccaggagatcatggaagcctgcttccaggcagcgacgggcatctac
agtgaaatctcgggcacgaaccagtatttcaagaagatctacgacgaccagaccgccttc
aagcgggacgcctatctctggatgcagctgtcggaatacaccttcgatacgttcatgatg
atccagcagcgggccggaaagctctaa
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integrated database retrieval system
