Rhizobium indicum: FFM53_018680
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Entry
FFM53_018680 CDS
T07009
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
rii
Rhizobium indicum
Pathway
rii03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rii00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FFM53_018680 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rii03400
]
FFM53_018680 (ung)
Enzymes [BR:
rii01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
FFM53_018680 (ung)
DNA repair and recombination proteins [BR:
rii03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FFM53_018680 (ung)
Prokaryotic type
FFM53_018680 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QKK18352
LinkDB
All DBs
Position
3855224..3855925
Genome browser
AA seq
233 aa
AA seq
DB search
MSDTSVSLEESWKAALEGEFSSPYMQQLKSFLVAQKEVGKRIFPKGSEYFRALDLTPISN
VKAVILGQDPYHGVGQAHGLCFSVRPGVRTPPSLVNIYKEMETDLGITPARHGFLEHWAK
QGVLLLNSVLTVEEGQAAAHQGKGWERFTDAVIRKVNDECESVVFMLWGSYAQRKAAFVD
TTRHLVLRAPHPSPLSAHNGFFGCGHFSKANAFLQSRGRAPIDWQLPADPHGV
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatacatccgtcagtctcgaggagagctggaaagccgcgctggagggggagttt
tcaagcccctacatgcaacagctcaaatccttcctcgtcgcgcagaaagaggtcggcaag
cggattttccccaagggcagcgaatatttccgcgctcttgatctgacgccgatctccaac
gtcaaggccgtgatcctcggccaggacccgtatcatggagtcgggcaagcccatgggctg
tgtttcagtgtccggccgggcgtgcgcacaccgccctccctggtcaatatctacaaggag
atggagacggatcttggtataacgccggcacgtcacggttttctagaacattgggcaaag
cagggcgtactcctgctgaacagcgtgctgaccgtcgaggaagggcaggcggctgctcat
cagggaaaggggtgggaacgcttcaccgacgccgtcatccgcaaggtcaacgatgaatgc
gaatccgtagtcttcatgctgtggggttcctatgcccaacgcaaggccgcctttgtcgat
acgacgcggcatctcgtgctccgggccccgcatccttcgccgctttcggcccataacggg
ttctttggctgcgggcatttttcgaaggcgaatgccttcctgcagtcgcgcggacgtgcg
ccgatcgactggcaattgccggccgatccccatggggtgtag
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