Rhizobium indicum: FFM53_020690
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Entry
FFM53_020690 CDS
T07009
Name
(GenBank) L,D-transpeptidase
Organism
rii
Rhizobium indicum
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Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
QKK18724
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Position
complement(4260486..4261889)
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AA seq
467 aa
AA seq
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MNRFLKSAFCFAAVLTALAATPPEAGAQQFRDRRQSDIVLVTPSGEILDYIPAGYIYARD
RSGNRVLIDDYGNVVATEMRARGYYPPRPGAREVYNDQYGNDPYYSDNNPDGDTRYSERG
AVTGGIPRDAAIERHPLGDQPYPEDNSIGNPQPGDDYAAIDPDQQIPPADQPRAAAPDEP
VITLNNKSKPEIVALQVFLDRAGVSPGVIDGHMGSNVTKAILAYDQMTGSKLDPNNTDAI
LEELRMTGGLPVVSYTITPADAAGPFVAEIPEDYSHKALLPSLAYTSTTEMLAERFHMDE
AFLKEMNPGADFTVPGTVIKVVNPGEPKSGAVARIIADKGRKQVFAYDGAGNLLAAYPAS
IGSTDTPSPSGTVNVERVALNPGYTYNPKINFQQGANDKILNIPPGPNGPVGTVWMALSK
PTYGIHGTPEPSKIGRTQSHGCIRLTNWDATELAKMVKPGVTVEFVD
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
gtgaatcgctttttgaagtcggcattttgcttcgcggccgttctgactgcccttgcggct
acaccgccagaggcaggcgcgcagcagttccgcgaccgccgccagagcgatatcgtgctt
gtgacgccgagcggcgaaatcctcgactatattccagccggctatatctacgcccgcgac
cgtagcggcaatcgcgtgttgatcgacgactatggcaacgtcgtcgctaccgagatgcgc
gcccgcggctactatccgccgcggcccggcgcacgcgaagtctataacgaccagtacggc
aacgacccctattattccgacaacaatcccgatggcgatacacgttattccgagcgcggc
gccgtcaccggcggtattccgcgcgatgccgcgatcgagcgccatccgctcggcgaccag
ccctatcccgaggataacagcatcggcaatccgcagcccggcgacgattatgccgcgatt
gatcccgaccagcagatcccgcccgccgatcagccgagggcggccgcacccgatgaacct
gtcatcacgctgaacaacaaatcgaagccggagatcgtcgcattgcaggtcttcctcgac
cgcgccggcgtctcccccggcgtcatcgacggccatatgggttcgaacgtcaccaaggcg
atcttagcctacgatcagatgaccggctcgaagctcgacccgaacaacactgacgccatt
ctggaagagctgcgcatgaccggcgggctgcccgtcgtcagctatacgatcacgccggcc
gatgcggcaggccccttcgtcgcagagattccggaagactattcgcataaggcgctgctg
ccgtcgctggcttacacctcgaccaccgagatgctggccgagcgtttccacatggatgag
gctttcctcaaggagatgaaccccggcgccgacttcaccgttcctggcaccgttatcaag
gtcgtcaatccgggcgagccgaagagcggcgcggtcgcgcgcatcatcgccgacaagggc
cgtaagcaggtcttcgcttatgacggcgccggcaatctcctcgccgcctatccggcgtcg
atcggctccaccgataccccctctccgtcaggcaccgtcaacgtcgagcgtgtcgccctc
aatcccggttacacctacaatccgaagatcaatttccagcagggcgccaacgacaagatc
ctcaatatcccgcccggcccgaacggccccgtcggcaccgtctggatggcgctttccaag
ccgacctacggcatccacggcacgcccgagccctcgaagatcggccgcactcagagccac
ggctgcatccggctgaccaactgggatgccaccgagcttgccaagatggtcaagccggga
gtgacggtcgaattcgtcgactga
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