KEGG   Rhizobium indicum: FFM53_020950
Entry
FFM53_020950      CDS       T07009                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
rii  Rhizobium indicum
Pathway
rii03030  DNA replication
rii03430  Mismatch repair
rii03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:rii00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    FFM53_020950
   03430 Mismatch repair
    FFM53_020950
   03440 Homologous recombination
    FFM53_020950
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rii03032]
    FFM53_020950
   03400 DNA repair and recombination proteins [BR:rii03400]
    FFM53_020950
Enzymes [BR:rii01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     FFM53_020950
DNA replication proteins [BR:rii03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     FFM53_020950
DNA repair and recombination proteins [BR:rii03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     FFM53_020950
SSDB
Motif
Pfam: RNase_T Rv2179c-like
Other DBs
NCBI-ProteinID: QKK18775
UniProt: A0ABX6PKE9
LinkDB
Position
4320598..4321188
AA seq 196 aa
MKTIAIDFETANEQRGSACSVGLAWIEDGRVTRVEERLIRPRDMRFSGMNIAIHGIRPEH
VEDAPEFPEVMDEFEEDFRGATMIAHNAAFDFSVWRASLDLYRQSYPELTYLCSLKMAQR
IWPHFLSHRLNLIAEHLGLRFVHHNAAEDAAVCAAAAIEMARAVKAHAVHAIPALIGMRP
GRLTAQAYEPCTCRKG
NT seq 591 nt   +upstreamnt  +downstreamnt
ttgaaaactatcgcgattgacttcgagacggcgaacgaacagcgcggcagcgcctgttcc
gtcggccttgcctggatcgaggacggcagggtgacgcgcgtcgaggagcggctgatccgg
ccgcgggacatgcgcttttcagggatgaacatcgcaatccacggcatccggccggagcat
gtcgaggacgcgcccgagttccccgaggtaatggatgagttcgaggaggattttcgcggc
gcgacgatgatcgcgcacaatgcggccttcgatttcagcgtctggcgggcgagtctcgat
ctctaccggcaatcctatcctgagcttacctatctctgcagcctgaagatggcgcagcgg
atctggccgcatttcctctcgcaccggctgaacctgatcgccgagcatctcggcctgcgt
ttcgtgcatcataacgccgccgaggatgccgccgtctgcgcagcggcggcaatcgagatg
gcaagggcggtcaaggcccatgccgtccatgctataccggcgctgatcggcatgagaccc
ggccggctgacggcgcaggcctatgagccctgcacctgccgaaaaggctga

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