Rhizobium indicum: FFM53_023800
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Entry
FFM53_023800 CDS
T07009
Name
(GenBank) type I secretion system permease/ATPase
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
rii
Rhizobium indicum
Pathway
rii02010
ABC transporters
rii03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
rii00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
FFM53_023800
03070 Bacterial secretion system
FFM53_023800
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rii02000
]
FFM53_023800
02044 Secretion system [BR:
rii02044
]
FFM53_023800
Transporters [BR:
rii02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
FFM53_023800
Secretion system [BR:
rii02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
FFM53_023800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
Peptidase_C39
ABC_ATPase
AAA_16
AAA_29
AAA_21
AAA_22
AAA_18
DUF87
MeaB
AAA_30
DUF5906
nSTAND1
nSTAND3
NB-ARC
PRK
KAP_NTPase
Motif
Other DBs
NCBI-ProteinID:
QKK19607
LinkDB
All DBs
Position
4880168..4882339
Genome browser
AA seq
723 aa
AA seq
DB search
MGSLDPGIANAAAQPVDSGLRALCGIAAFYRIAADPNQLHHELAIGSGVASELDLLRAAS
AVGLKARAVRELTEARLRNLPVPAIVHMPEGTFAILGGPTPAGRYRVIDPVTRADRELSA
AELLIETGARALLVARKLGGAGTDPRTFGLKWFLPSLWRYRKPLAHVLVASLFVQIFALV
TPLFFQVVVDKVLTHKGYSTLFVLVAGIAIIGLFDVVLQYLRTYALSHTTNRIDVELGQR
LFRHLLRLPLDYFETRSAGQTVARVRELETIRNFLTGQGLFAAIDLVFAIVFLCILWLYS
WSLTLIVLGSIPLYALVGFLVRPPLRDMVKEKFNRGAVSQQLLVEAIIGIQTVKAAAVEP
VMQAQWEEKLAAYVKTAFQTTLLGAGGQNVIQYISKLTTALLLLFGARAVINGELSVGSL
VAFNMIASQATAPVLRLSQLWQDFQQVQISIDRLGDILNTPMERTPATRLALPAPRGLIE
FKNVSFRYRPGGQDILKSINLHVRPGEVVGIVGASGSGKSTLTKLIQRLYLANEGQVLLD
GMDLSQMDPAWLRGHIGVVLQENLLFNRTIHENIALANPALPRAQVLAVARLSGADEFIS
KLPQGYDTVIEERGANLSGGQRQRIAIARALATNPPLLIFDEATSALDYESERVVQENMR
HIVQGRTVIIIAHRLAAVRNCHRIIGMADGRVVEMGTHDELLQKKDGLFARLWTLQHDTR
VPA
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgggcagcctcgaccccggcatcgcaaatgcggccgcgcaaccggtggattccggcctg
cgtgctttgtgcggaattgcagccttttaccggattgctgccgatccgaaccagcttcat
catgagcttgcaattggcagcggggttgcttccgagctggatcttctgcgggcggcatca
gcagtcggattgaaggcaagggctgtccgcgaattgaccgaagcacgcctcagaaatctg
cctgttcccgcgatcgtgcatatgccggaaggcacattcgccattctcggcggaccgacc
ccggccggccgatacagggtcattgatcccgtaacacgcgccgatcgtgaattatcggca
gccgagctgctgatcgagacaggtgcccgcgcgcttctcgtggcccggaaattgggaggg
gcaggaacagatcccaggaccttcggactgaaatggtttctgccgtccctctggcgctac
cgcaagccacttgcacacgtcctcgtcgcctcgctcttcgttcagatttttgccctggta
acgccgctcttcttccaggtagtcgtcgacaaggttctcacgcacaagggctattcgacg
ctgttcgttctggtcgccggaattgcgatcatcggtctcttcgatgtcgtcttacagtac
ctgcgaacctatgcgttgtcgcacacgaccaaccgtatcgacgtcgagctgggacaacgg
cttttccgtcacctgcttcgcttgccgctcgactatttcgaaacgcggtctgcaggccag
acggtcgcccgtgtccgggaattggaaacgatccggaacttcctcacggggcaggggctg
tttgccgcaatcgacctggtattcgccatcgtctttctctgcatcctgtggctctactcg
tggagcctgacgctgatcgttctcggctcgatcccgctctacgccctcgttggctttctc
gtgcgcccaccgcttcgcgacatggtcaaggagaagttcaaccgtggcgcggtcagccag
cagttgctcgtcgaggcgatcatcggcatacagaccgtaaaagcggcggcggtcgaaccg
gtcatgcaggcgcagtgggaagaaaagctcgccgcctacgtgaagactgcgtttcagacg
acgctgctcggcgccggcgggcagaacgtcatccagtacatcagcaagcttacgacggcg
ctgctgttgctgttcggtgcgcgcgctgtcatcaacggcgagctgtcggtaggctcgctc
gtcgccttcaacatgatcgccagccaggccaccgcacccgtcctccggctctcgcagctc
tggcaggacttccagcaagtccagatctcgatcgaccgtctcggcgacattctgaatacg
ccgatggagcgaacgccggcaacgcggcttgcccttcccgctccgagaggcctcatcgaa
ttcaagaatgtcagtttccgctaccgccccggcggtcaggatatcctgaagagcatcaac
ctgcatgtccgcccaggcgaggtggtcggtatcgtcggtgcttcggggtcgggtaaatcg
acgctgacgaagctcatccagaggctctatcttgccaacgaaggccaagtcttgctcgac
gggatggatctttcgcaaatggatccggcgtggttgcgaggtcacattggcgtcgttctg
caggagaacctgctcttcaatcgcacgatccacgagaatatcgcgctcgccaatcccgca
ttgccgcgcgcccaggtcctggcggtggcccgtctttccggtgccgacgaattcatatcg
aaactgccgcagggctatgacaccgtcatcgaggaacggggcgccaacctgtcgggtggg
cagcggcagcgcatagccatcgcaagggcgctcgccaccaacccgccgctcctcatcttc
gacgaggcgacgagtgccctcgactatgaaagcgagcgcgtcgtccaggaaaacatgcgc
cacatcgtccagggtcgaaccgtgatcatcatcgcccatcgccttgccgccgttcgaaac
tgccacaggattatcggcatggcagacggccgggttgtcgagatgggaacgcatgacgag
cttctgcaaaagaaggatggtctctttgcgcggctctggacgttgcagcacgatacaagg
gttccggcatga
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