Rhizobium indicum: FFM53_024970
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Entry
FFM53_024970 CDS
T07009
Name
(GenBank) IclR family transcriptional regulator
KO
K19333
IclR family transcriptional regulator, KDG regulon repressor
Organism
rii
Rhizobium indicum
Brite
KEGG Orthology (KO) [BR:
rii00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rii03000
]
FFM53_024970
Transcription factors [BR:
rii03000
]
Prokaryotic type
Helix-turn-helix
IclR family
FFM53_024970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IclR_C
HTH_IclR
MarR_2
MarR
TrmB
Dimerisation
HTH_27
HTH_24
HTH_Cmi2_C
Rrf2
Motif
Other DBs
NCBI-ProteinID:
QKK19709
LinkDB
All DBs
Position
pPR12A201:113582..114346
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AA seq
254 aa
AA seq
DB search
MDKRQSSKSDIVQSVDVCIDVLLNVAKNPDIRLTEVAQNLEETKPRILRMLRTLERRGLV
RKSDTGTYRLGTTAIILGTAASTQVDLVRIANPILEEVGQKANETTQLRIIDNGESLCIA
KFEPMRDLRVQAMIGRRRPLTAGSYKVLLAYLHPQVQLQMIPETLPRLTKRTITDRGKLV
AELDKIRRQGFCVSYGEVSEQLVSVSVPVLAFDGSVIAAVNVGAPAFRTQKSDVDRFIVL
LKEASSKISARLGW
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atggacaaaagacaatcatcaaaaagcgatatcgtgcaatctgttgatgtctgcatcgac
gtattgctgaatgtcgccaaaaacccggatatcagactgaccgaggtggcgcagaacctt
gaggaaaccaagccgagaattttgcgcatgttacgcacactggaacggcgcggcctggtg
cgcaagagcgatacgggcacttatcggctggggacgactgcgatcattctcgggactgct
gcctcgacacaggttgatctggtgcgaatagccaatcctatccttgaagaagtcggccag
aaggcgaacgaaaccacccagctcaggatcatcgacaatggggaatccctgtgcattgca
aagttcgaaccgatgcgcgacttgcgggtgcaggcgatgatcggtcgaaggcggccgctc
acggccggctcgtacaaggtgcttctcgcctatctccatccccaggtgcagttgcaaatg
atccccgagactttaccgcggctgaccaagcgcacgatcacggatcgtggcaagctggtt
gctgaattggataaaatccgtcgccagggattttgtgtgagctatggtgaagtcagcgag
caactcgtctccgtctcggtgccggttctggcattcgacggatccgtgatcgccgcggtg
aatgtcggcgccccggcatttcgcacgcaaaaaagcgatgtcgaccgcttcatcgttctg
ctgaaggaagcctccagcaagatatcggctcggctgggatggtag
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