Rhizobium indicum: FFM53_028250
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Entry
FFM53_028250 CDS
T07009
Name
(GenBank) extracellular solute-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
rii
Rhizobium indicum
Pathway
rii02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rii00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
FFM53_028250
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rii02000
]
FFM53_028250
Transporters [BR:
rii02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
FFM53_028250
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
Motif
Other DBs
NCBI-ProteinID:
QKK20313
UniProt:
A0ABX6PNS5
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All DBs
Position
pPR12A201:complement(838896..840128)
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AA seq
410 aa
AA seq
DB search
MSNMEINRRSLLKRSAGVMALAMGGGTHLLSSRAAYAQAADLAGQQLRTIGLSVTVQERI
LEEFKKASGVGGTSGTAATFPDAQTKILSGSKDYDCWEIIAERLPSIVMTDNVEVIPAAS
LKNWANIREVFTKPSDKWDVKSQITGQIWADEAQTTLNMVPAVYNYDSIGYNPDVVSAEE
ANTWAAIFDPKWKGKSGLNTDPLIAFGQAIMAMNTLGLSNVKNPGNATAAEIDEAAAFLI
SKKKEGQFRALWGDFGELVNLMASGEMVVCDAWQPAVMAVKAQGKPCKYAVPKEGYRGWA
IGPTMIAGTTNKEAVIAYADYWLSGEPGIAVSEQGYYSPSTNIKDVMAPEKYAFWYEGKP
WVGAEERGIKEGDLRDGGSLEERAANVAYWHQWPDEYDHLIQKWDEFLSA
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacatggaaatcaatcgccgctcccttctgaagcggtccgcaggcgtcatggcg
cttgccatgggcggcggcacgcatctgctgtcgtcgcgcgcagcctatgcgcaggcggcc
gaccttgccggccagcagctgcgcactatcggcctttcggtcacggttcaggaacgcatt
cttgaagaattcaagaaggcgtccggcgtcggcggcacctctggaacggcagcgaccttc
ccggatgcgcagaccaagatcctgtccggttcgaaggactatgattgctgggaaatcatc
gccgagcgtctgccgtcgatcgtcatgaccgacaatgtcgaagtgatcccggccgcatcg
ttgaagaactgggcgaacattcgcgaggtgttcaccaagccgagcgacaagtgggacgtg
aaatcgcagatcaccggccagatctgggccgacgaggcgcagaccacgctcaacatggtg
cctgccgtctataactacgattcgatcggctacaatcccgacgtcgtcagcgccgaggaa
gccaacacctgggcggcgatcttcgatccgaagtggaagggcaagtccggcctcaacacc
gacccgctgatcgctttcggccaagccatcatggcgatgaacaccctcggcctttccaac
gtaaaaaatcccggcaatgccacggcggctgaaatcgacgaggcggctgcgttcctgatt
tcgaagaagaaggaaggtcagttccgcgcgctgtggggtgatttcggcgagctcgtcaac
ttgatggcatcgggcgaaatggtcgtctgcgacgcctggcagccggcggtcatggccgtc
aaggcgcagggcaagccctgcaagtacgcggtgccgaaggaaggttatcgcggctgggcg
atcggcccaacgatgatcgccggtacgaccaacaaggaagccgttatcgcctacgccgac
tactggctttccggggagcccggcatcgcggtttccgagcagggctactattcgccatcg
acgaacatcaaggatgtcatggcaccggagaaatatgccttctggtatgagggcaagccc
tgggtcggcgcggaagagcgcggcatcaaggaaggcgatcttcgggacggtggttcgctt
gaggagcgcgcggccaatgtcgcctattggcaccagtggccggatgaatacgaccacctc
atccagaagtgggatgagttcctgagcgcataa
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