Rhizobium indicum: FFM53_028830
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Entry
FFM53_028830 CDS
T07009
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
rii
Rhizobium indicum
Pathway
rii03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
rii00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
FFM53_028830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rii03400
]
FFM53_028830
DNA repair and recombination proteins [BR:
rii03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
FFM53_028830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
QKK20406
LinkDB
All DBs
Position
pPR12A201:953261..954073
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AA seq
270 aa
AA seq
DB search
MAPKYYWKGYLKLSLVTCPVAMTPATSESEKVRFHTLNKETGNRVVSRYIDSVTGKPVKD
ENEAKGYARGENDYVILTEDDLDAVALDTVKTIDIDRFVPADSIEWIYLEKPHYLMPNDA
VGNEAFAVIRDAMKADKVFGVSKLVMGRRERAVVLEPRGEGIVLWTLRFGDEVRPEENYF
EDIDEQADPDLIPLVQQLIKQKTARWSPDMVSDPIQESLLKIIAEKKKALKPEKAAKGKA
AEVAPKSNVVSIMDALRKSVEADLKGRKSG
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atggctccgaaatattactggaaaggctatctcaaactctctctggtcacctgccctgtg
gcaatgaccccggctacgagcgaaagcgagaaggttcgcttccatacactcaacaaggag
acgggcaaccgcgtcgtttcccggtacatcgattccgtcacgggcaagcccgtcaaggac
gagaacgaagccaagggctacgctcgcggggagaacgactacgttatcctcaccgaagac
gatctggatgccgttgcgctcgacacggtaaagacgatcgacatcgacaggttcgtcccg
gccgacagcatcgagtggatctaccttgagaagccgcattacctgatgccgaacgacgcc
gttggcaacgaggcatttgcggtgattagggatgccatgaaggccgacaaggttttcgga
gtgtcgaagctcgtgatgggccgccgagagcgggcggtcgtcctggaaccgcgcggcgaa
ggcatcgtgctctggactttgcgtttcggcgacgaggttcgaccggaggagaattacttc
gaagacatcgacgagcaggccgatccggatctcattccccttgtgcagcagctcatcaag
cagaagaccgcgcgctggtctccggacatggtgagtgatccaatccaggagagcctgctc
aagatcatcgctgagaagaagaaggcgctgaagccggaaaaggcggcgaaggggaaggcg
gccgaagtcgctccgaagtccaatgtggtcagcatcatggatgcgctccggaagagcgtt
gaggcagatcttaaaggtaggaagtcagggtag
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