Rhizobium indicum: FFM53_029020
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Entry
FFM53_029020 CDS
T07009
Name
(GenBank) mechanosensitive ion channel family protein
KO
K22044
moderate conductance mechanosensitive channel
Organism
rii
Rhizobium indicum
Brite
KEGG Orthology (KO) [BR:
rii00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rii02000
]
FFM53_029020
Transporters [BR:
rii02000
]
Other transporters
Pores ion channels [TC:
1
]
FFM53_029020
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MS_channel_2nd
MS_channel_3rd
MS_channel_1st
HMA_PCA1
Motif
Other DBs
NCBI-ProteinID:
QKK20435
LinkDB
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Position
pPR12A201:992137..994053
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AA seq
638 aa
AA seq
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MKWIAGLFLALTMSAFAHAQEAPRPQKVDDLVRLLQDPEVRSWLEKAPGPSSIAVEEVDA
GLATWEEATRSRIDGVVQAVPRIPGEFMAAAFRTRADALSHGKLPVFVVFLGLTAVGLFA
EWMFARLRRHAEGLQERLLAIGVFAAAMGVVFFAFDWPARPRIVLLVWLLALLAYRTVAA
LIEAAVLTSSARRRAKGFAGVAVIAIAAASLGQPLSIDPAATEAISFCFSIALLALAVEG
AVSSSERPLGTRISMCLAFVVIWALWCVGLHGLFWLGVYAMALPAVLRFTGRAAAEAFPF
EPDSTKRVLLVRGSRAVVVAAAAVWLALVWRFDPNSLVHSDHVVAAISYGLLKSVVVLLL
ADLAWHLARSWIDRRLTVSPGLAVDASQAARQGRLRTLLPIFRNVLAVMVAVVAGLIVLA
ELGVEIGPLIAGAGIFGVALGFGSQTLVKDVVSGVFYLLDDAFRVGEYIQAKSYKGTVEG
FSLRSVRLRHHRGPVFTVPFGELGAVENMSRDWVIDKFRVNVSYDADIEKARKLAKKIGE
ELKADPELGPLFIEPLKMKGVEEFGDYGIVLSFAMTTVPGMQTYIRRKAYAKIREAFKAN
GIDFATPSVQVGGDARDSAAAVATAIRTQQAKGVAEEA
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgaaatggatcgccgggctttttctggctctgacaatgtccgcctttgctcacgctcag
gaggctccacgaccccagaaggtcgacgatctcgtgcggctgctacaggatcccgaggtt
cggtcatggctagagaaagcgcccggcccgtcgtcgatagccgtcgaggaagtcgacgcc
gggctggcgacatgggaggaggccacgcgaagccggattgatggcgtcgttcaggcagtc
ccgagaattcctggcgagttcatggccgcagcttttcgcacgagggcggacgccttgtcg
cacggaaagctgccggtgttcgtcgtcttccttgggctgacggcggtcggacttttcgcc
gagtggatgttcgcgcggttgagacgacacgcggaagggctgcaggaacgcctgctggcg
atcggcgtcttcgcggcggccatgggcgtggtcttcttcgcattcgactggcccgcccgc
ccacgcatcgtcctcctggtttggctgctggcactcctggcataccgtacggtcgccgcg
ctcatcgaggcggccgtactcacgtcctccgctcgcaggcgggcgaagggctttgccgga
gttgccgtgatcgccattgccgccgcaagcctcggccagccattgtcgatcgacccggcg
gcgacggaggcgatttcgttctgcttttcgatcgctctcctcgctttggccgtcgagggc
gccgtctcctcgtccgagagaccccttggcacgcgcatatcaatgtgcctcgccttcgtc
gtcatctgggcgctctggtgcgtcggtctgcacggtctgttctggctgggcgtctatgcg
atggccctgcccgcggtactgcgcttcaccggtcgcgcggcggccgaagcgtttcctttc
gaacctgacagcacgaaacgtgttctccttgtccgcggcagccgggccgtggtcgtggcg
gccgcggctgtgtggctggccctcgtctggcggttcgatccgaactccctggtccacagc
gatcatgtggtggccgcgatatcctacgggcttctgaagagcgtggtcgttctgctgctc
gccgacctcgcgtggcatctcgcgaggtcgtggatagacagaaggctcaccgtttcgccc
ggcctcgctgtcgatgcatctcaggcggcccggcaaggacggcttcggacgctcctgccg
atcttccggaacgtgctcgccgtcatggtggcggttgtagccggcctgatcgtgctggcg
gaacttggcgtcgagatcgggcctctgatcgcaggcgccggcattttcggcgtcgcgctc
ggcttcggatcgcagacgctggtgaaggacgtcgtcagcggggtcttctaccttctcgac
gacgcctttcgcgtgggcgagtacatccaggcgaagagctacaaggggaccgtcgagggg
ttcagcctccggtcggtgcggctgcgtcatcaccgcggcccggtgttcaccgttccgttc
ggcgaacttggagccgtcgagaacatgagccgcgactgggtgatcgacaagtttcgggtg
aacgtcagctacgacgcggacattgagaaggcgcgcaagctcgcgaaaaagattggggag
gagctgaaggccgatccggaactcgggccgctcttcatcgagccgttgaagatgaagggc
gtcgaggagttcggtgactacggcatcgtcctcagcttcgcgatgaccacagtgccgggc
atgcagacctacatccggcgcaaggcatacgcgaagatccgcgaggcgttcaaggcgaac
ggcatcgacttcgcgacgccgtcggttcaagtcggcggcgatgccagggacagcgcagcg
gcggtcgcgacggcgatccggacgcagcaggccaagggggtggcggaggaggcttag
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