Rhizobium indicum: FFM53_030450
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Entry
FFM53_030450 CDS
T07009
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K10857
exodeoxyribonuclease X [EC:3.1.11.-]
Organism
rii
Rhizobium indicum
Pathway
rii03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rii00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
FFM53_030450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rii03400
]
FFM53_030450
DNA repair and recombination proteins [BR:
rii03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
FFM53_030450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
QKK20752
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All DBs
Position
pPR12A202:complement(149998..150786)
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AA seq
262 aa
AA seq
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MLIESSGILSKPVDHASRIRVVDLETAGNGPNDVCEIGWQDVVLGHDGRWRVDDERGSLL
INPGRPISPETMAIHHIVDAEVATAPFWKEIAASVLRPEGGVIALAAHRASFEQRYCTPR
FSRGAAWICTWKCALRLWPELPRFSNQMLRYLRMPEGLVHAIGLPAHRAMPDAYVTGHHL
RDMLNESTFEQLVKWSSEPGLLPRVPTGPERGKSWDRVDIAVLQAFARDRDTDVRFSAET
ELRRRGDADVKVADEAEQGTLL
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgttgattgagagcagtgggatcctatcaaaacctgtagatcatgcatctcgcatccgg
gtcgttgacctcgaaacagccgggaatggcccgaatgatgtttgcgagatcggctggcag
gacgtcgtgcttggccatgacgggagatggcgggttgacgatgagcgcggatcattgctt
ataaatccagggcgaccgatctctcctgagacgatggcaatacatcacatcgtggacgca
gaggtcgcgacggcacctttttggaaagaaattgccgcaagcgtcttacggccggaaggt
ggagtgatcgcactggctgcacatcgggcaagtttcgagcagcgctactgcacccccaga
ttttccaggggagcggcctggatatgtacgtggaaatgcgcgcttcgcctgtggcctgaa
ctgccgaggttctccaaccagatgctccggtatctgcgtatgcccgagggactggtgcac
gcgatcggtcttcccgcccaccgcgcaatgcccgatgcgtacgtaaccggacatcatttg
cgggacatgttgaatgaatccaccttcgagcaactggtgaaatggagcagcgagccgggc
cttttgccacgagtacctacaggccccgagcgtggaaaaagctgggatcgggtggatatt
gcggtattgcaggcgttcgctcgcgatcgggataccgacgtccgcttcagcgcggagacg
gaacttcgccgccgtggtgacgcggacgtaaaagtggctgacgaagccgagcagggaaca
ctgctttag
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