Rhizobium indicum: FFM53_031035
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Entry
FFM53_031035 CDS
T07009
Symbol
pbpC
Name
(GenBank) penicillin-binding protein 1C
KO
K05367
penicillin-binding protein 1C [EC:
2.4.99.28
]
Organism
rii
Rhizobium indicum
Pathway
rii00550
Peptidoglycan biosynthesis
rii01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rii00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
FFM53_031035 (pbpC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
rii01003
]
FFM53_031035 (pbpC)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rii01011
]
FFM53_031035 (pbpC)
Enzymes [BR:
rii01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
FFM53_031035 (pbpC)
Glycosyltransferases [BR:
rii01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
FFM53_031035 (pbpC)
Peptidoglycan biosynthesis and degradation proteins [BR:
rii01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
FFM53_031035 (pbpC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
BiPBP_C
Transpeptidase
Motif
Other DBs
NCBI-ProteinID:
QKK20866
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All DBs
Position
pPR12A202:complement(279822..281900)
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AA seq
692 aa
AA seq
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MRRRHKFAIRSAAGIILAGAALFALDAADRAFPPPLDRANAVSAEVLDADGQLLRAFATS
EGRWRLKTTVPEVDPQFLRMLIAYEDQRFYDHGGIDPWALGRAAVQLVSNGRIVSGASTL
SMQVARLIEPREGRSLSAKILQLVRAVQIERRLSKEQILDLYLTHAPYGGNLEGVRAASL
AYFGKESRRLTIAEAALLVALPQLPERRRPDRNLKAAEAARKRVLDRVAVAEAVGDGEAE
RAEDVAVPPRRMRLPALAAHVAEAALRKEPTVLKHQTTLKKQVQQGLEAVARAAAMKLGP
KLSLAMVMADAQTGAIVGEVGSADYFDASRSGWIDMTRVNRSPGSTLKPFIYGLAFEQGL
VSQETIIEDRPADFFGYRPRNFDMSYQGDVTVREALQLSLNVPAVKLLDAVGPSRLMVRF
RRAEVRPVLPPNETPGLAIGLGGVGITLKDLVQLYTALANRGQPARLGDGVTGAPAKLVG
EPLLEPVAVWNVADILSGVIPPAGAPQRGIAYKTGTSYGYRDAWSVGYDGRYVLGVWVGR
PDNSAVPGLTGYGTAAPILFEGFAKSGIVTTPLPRPPAGAVRIAQSELPISQRRFALNAS
GLLASGREAAPQIIYPPEGAHVDLGAGQGNLSPLMLKLQGGRAPFRWLANGKPLPDLSRR
RIQQWLPDGGGYSKLTVIDSAGRAASVGVFID
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atgaggcggcggcacaagtttgcgatcaggtcggctgccggcatcattcttgccggcgcg
gctctctttgcgctcgatgccgccgacagggcctttccgccgccactcgacagggcgaat
gccgtgtcggccgaagtgctggatgccgatgggcaattgctgcgtgcctttgcgacatcg
gaaggccgctggcggctgaagaccacggtccccgaggtcgatccgcaattcctgcgcatg
ctgatcgcctatgaggatcagcgtttctatgaccacggtggcatcgacccctgggcgctc
gggcgcgctgccgtgcaactggtcagcaacggccgcatcgtctccggcgcctcgacgctg
tcgatgcaggtagcgcggttgatcgagccgcgcgaagggcgctcgctttcggcaaagatc
ttgcaattggtgcgcgccgtgcagatcgaacggcggctgtcgaaggaacagattctcgac
ctctatctcacacacgcgccctatggcggcaatctggaaggcgtgcgcgccgcaagcctt
gcctatttcggcaaggaatcgcgccgcctgacgatcgccgaggcagcgttgctcgtcgcc
ctgccgcaattgccggaacggcgccggccggaccgcaatctcaaggcagccgaggccgcg
cgcaagcgtgtgctcgaccgcgtcgcggtcgccgaggccgttggcgacggcgaagcagag
cgggccgaggatgtcgccgtcccaccgcggcgcatgcggttgccggcactcgccgcccat
gtcgccgaagcagcgctgcgcaaggagccgacggttctcaagcatcagacgacgctgaag
aaacaggtgcagcaggggctggaggcggttgcgcgggcagcggccatgaagctcgggccg
aagctttcgctcgccatggtgatggcggatgcgcaaaccggcgcgatcgtcggcgaggtc
ggctcggccgattatttcgacgccagccgttccggctggatcgacatgacgcgcgtcaat
cgctcgccgggctcgacgctgaagcccttcatctacgggctcgccttcgagcagggactg
gtgtcccaggagaccatcatcgaagaccggcccgccgatttcttcggctaccggccgcgc
aatttcgacatgagctatcagggcgacgtcaccgtgcgcgaggcgctgcagctttcgctg
aacgtgccggccgtcaagctgctcgatgccgtcgggccgtcgcggctgatggtccgcttc
cgccgcgccgaggtacgccccgtcctgccgccgaatgagacgccgggactggcgatcggt
cttggcggcgtcggcatcaccctgaaggatctggtgcaactctatacggcgctcgccaat
cgcggtcagccggctaggctcggcgacggtgtcaccggcgcaccggccaagctcgtcggc
gaaccgctgctggaaccggtcgcggtctggaacgtcgccgatattctctccggcgtcatt
ccccccgccggcgcgccgcagcgcggcatcgcctacaagaccggcacgagctacggctac
cgtgatgcctggtctgtcggctatgatggccgctatgtgctcggcgtctgggtcggacga
cctgataacagcgccgtgccggggttgaccggctatggcaccgccgcgcccatcctgttt
gaaggtttcgccaagtcaggcatcgtgacgacgcccctgccccgcccgcctgcaggcgcc
gtgcgcatcgcccagtccgagctgcccatcagccagcggcgtttcgccctcaatgccagc
gggctgctcgcctccggccgcgaggccgcgccgcagatcatctatccgcccgagggcgcg
catgtcgatctcggcgctggacaaggcaacctgtcaccgctgatgctgaagcttcagggc
ggccgcgcgcccttccgctggcttgccaacggcaagccgctgcccgacctctcccgccgg
cgcattcagcaatggctgcccgatggcggcggctactccaaactgaccgtcatcgattcg
gccggacgcgccgcaagcgtcggcgttttcatcgactag
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