Rhizobium indicum: FFM53_031660
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Entry
FFM53_031660 CDS
T07009
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
rii
Rhizobium indicum
Pathway
rii02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rii00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
FFM53_031660
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rii02000
]
FFM53_031660
Transporters [BR:
rii02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
FFM53_031660
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
QKK20978
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All DBs
Position
pPR12A202:complement(413227..415131)
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AA seq
634 aa
AA seq
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MQQWKRLAFGVALAALGLTATAKADDYTSLPRKETLIVENPEGTIKNPGWFNIWVNGGGG
VSTGLQQLTMDTLWYIDPEQGLGGATWDNSLAADKPQYNADFTEMTVKLRKGLFWSDGVE
FTADDVVYTVKTQMDHPGMIWSAAFSVQVASVEATDPSTVVFKLKKPNSRFHAIFTVRWN
GAWIMPKHVFEKVEDPLRYDFANPVSLGAYKLKSYDPQGKWYTWEKRDDWQRTSLARFGE
PAPKYVTYADPGPPDKRTIAQLEHNLDIIHDNTPEGMFTLKEKSKTIETWFPGFPFAHPD
PTLPAVIFNTQNPPFDNADVRWALALLIDIKAVDMASYRGAATLSALGVPPTAATMKDYQ
APMQDWLKNFEIDTGKSKIKPYDPTVGQQIADILRKQPKFKDQIPTDPEAISGAFGYGWW
KPDPKAAGELLEKAGFKKAGGKWLTPDGQPFKIRMTVEGDTRSVFTRAGTLIAQQWAAFG
IDAKAVPAAKLWQTALQPGDFQVAIAWSVETWGGDPDLSFFLDSWHSQFVAKKGDNQPPR
NWQRWSNPELDKIIESIRGISADDPKGVELGKDYLKLVAREMPTIPLMSYNVFTSMDTTY
WTGYPTIADPYTDPVPNWANSRLMMVKLKPAQPK
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgcaacagtggaagaggctcgcatttggcgtcgcgctggccgcactcggcctgacagcg
acggccaaggccgatgactacacctccttgccgcgcaaggagacgctcatcgtcgaaaat
ccggaagggacgatcaaaaatcccggctggttcaacatctgggtcaatggcggcggcggc
gtatcgaccggcctgcagcagctgaccatggatacgctctggtatatcgaccccgaacaa
ggacttggcggcgcgacctgggataattcgctggccgccgacaagccgcaatataatgcc
gacttcaccgagatgaccgtgaaactgcgcaaggggctcttctggagcgacggcgtggag
ttcacggcagacgacgtggtctataccgtgaagacgcagatggatcaccccggcatgatc
tggagtgctgccttctcggtgcaggtggcaagcgtcgaggcgaccgacccctcgactgtg
gtgttcaagctgaagaagcccaattcgcgcttccacgccatcttcaccgttcgctggaac
ggcgcctggatcatgcccaagcatgtcttcgagaaagtcgaagatccgcttcgctatgat
ttcgccaatcccgtctcgctcggcgcctataagctcaagtcctacgatccgcagggcaag
tggtatacttgggagaagcgtgacgactggcagcggacatcgcttgcccgcttcggcgag
ccggccccgaaatatgtcacctatgccgatcccggcccgccggataaacgcaccatcgct
cagctcgagcacaatctcgatatcattcacgacaacacgcctgagggcatgttcacgctg
aaggaaaaatccaagacaatcgagacatggttcccgggctttcccttcgcccatccggac
ccgacacttccggccgtgatcttcaacacccagaatccgcccttcgacaacgccgatgta
cgctgggcgctcgccctgctgatcgacatcaaggcggttgatatggcgagctatcgcggg
gcggcgacgctttcggcgctcggcgtgccgccgacggcggccacgatgaaggactatcag
gcgccgatgcaggattggctgaagaatttcgagatcgataccggcaagagcaagatcaag
ccttatgacccgacggtcgggcaacagatcgccgatattctgcgcaagcagccgaagttc
aaggaccagatcccgaccgacccggaggcaatcagcggtgcctttggctatggctggtgg
aaaccggatccgaaggctgccggcgaactgctggaaaaggcaggcttcaagaaagccggc
ggcaaatggctgacccctgatggacagcccttcaagatccggatgacggtcgagggcgac
acacgctcggtcttcacccgtgccgggacgctgattgcgcagcaatgggccgcattcggt
atcgacgccaaagccgtgccggccgcgaaactttggcagacggcgctacagcccggcgat
ttccaggtggcgatcgcctggagcgtcgaaacctggggcggcgatcccgacctgtcgttc
ttcctggacagctggcactcgcagttcgtggccaagaaaggtgacaatcagccgccgcgc
aactggcagcgctggagcaatccggagctcgacaagatcatcgaaagcatccgcggcatc
agcgccgacgatcccaagggcgtcgagctcggcaaggattatctgaagctggtcgcccgc
gaaatgccgacgatcccgctgatgtcgtataacgtcttcacctcgatggatacgacctat
tggaccggttatccgaccatcgccgacccctataccgatccggtgccgaattgggccaac
tccaggctgatgatggtcaagctgaagccggcacaaccgaaataa
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