Rhizobium indicum: FFM53_031775
Help
Entry
FFM53_031775 CDS
T07009
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
rii
Rhizobium indicum
Brite
KEGG Orthology (KO) [BR:
rii00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rii03032
]
FFM53_031775
03400 DNA repair and recombination proteins [BR:
rii03400
]
FFM53_031775
Enzymes [BR:
rii01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
FFM53_031775
DNA replication proteins [BR:
rii03032
]
Prokaryotic type
DNA Topoisomerases
FFM53_031775
DNA repair and recombination proteins [BR:
rii03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
FFM53_031775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
ACT
Motif
Other DBs
NCBI-ProteinID:
QKK21001
LinkDB
All DBs
Position
pPR12A202:442832..443839
Genome browser
AA seq
335 aa
AA seq
DB search
MNAEAISDLGLVYVSDTEPGIRRRRKGKGFSYVMPDGTTLADELQRARIGALGLPPAYEN
VWICLHDNGHLQATGFDARGRKQYRYHKEWQSFRSAGKFHQLIEFGRALPRIRRTVLRHL
DTGAEDVNGVLAALTTLLDEAHLRVGNQAYVRENGTYGATTLLKRHLKIVDGQIELKFRA
KGGKRVQRSLKHPRLQKILEEIADLPGRQLFVWKDESGALKPIDSGRLNAYLAEISGIPI
SAKTFRTWAGSLAAFGAAREAILSGGRPTVKQMSEAAAEALHNTPAISRSSYIHPAIIAL
AGNDHPLIESGNEPLRGLRAEENRLLDFLTSEIEE
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgaatgccgaagccatcagcgaccttggtctcgtctatgtcagcgataccgaaccaggc
atccgcagacgaaggaagggtaagggtttcagctatgtgatgcccgacggcacgaccctt
gccgacgaattgcagcgggcgcgcatcggcgcgctcggtctgccgccggcctatgaaaat
gtctggatctgcctccacgacaacggccatctgcaggcgaccggcttcgatgcgcgcggg
cgcaagcaataccgctaccataaggaatggcagtccttccgaagcgcgggtaaattccat
cagctgatcgagttcggccgggccctgcctcggatacgccgcaccgtgctgcgccatctc
gacaccggtgcggaggatgtcaacggcgtgctggcggctttaacgacgctgctcgacgag
gcgcacttacgcgtcggcaaccaggcctatgtcagggagaacggcacctatggcgcaacg
acgctgctgaagcggcacctgaagatcgtcgacgggcagatcgagctgaaattccgcgcc
aagggcggcaagcgtgtccagcgcagtctcaagcatcccaggctgcagaagatcctggag
gagatagccgacctgcccggccgccagctcttcgtctggaaggatgaaagcggggcgctg
aagccgatcgattccggccggttgaacgcctatctggccgagatatctgggattcccatt
tcggcgaagaccttccgcacctgggccggatcgctggcggccttcggggcggcgcgcgag
gcgatcctcagtggcggccggccgacggtaaagcagatgtcggaggctgcggccgaggcg
ctgcacaacacaccggcgatctcgcgctcgagctatatccatccggcgatcatcgcgctc
gccggcaacgatcatccgctgatcgagagcggcaacgagccgctgcggggcttgcgggcc
gaggaaaacaggctacttgatttcctcacaagcgagatcgaagaatga
DBGET
integrated database retrieval system
