Rhizobium indicum: FFM53_034075
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Entry
FFM53_034075 CDS
T07009
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
rii
Rhizobium indicum
Pathway
rii02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rii00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
FFM53_034075
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rii02000
]
FFM53_034075
Transporters [BR:
rii02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
FFM53_034075
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_6
SBP_bac_11
YqbF_HeH
Motif
Other DBs
NCBI-ProteinID:
QKK21425
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All DBs
Position
pPR12A204:complement(155154..156299)
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AA seq
381 aa
AA seq
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MNRREFLITSSAAAGLLALPRFASAAAGTIDLYSGSDANIVDLWNNVIRPAFEKAHPGVA
LKVTDAGDNNGLRAIADRALAALKTKTDPQADLFEQFDPRLPSGGIDAGLWVKFSAENIE
GYDHINPLAFDTPYSLPYRGSQVLLAYDTTKLDPKDAPKSWDQLTAWIKANPGQFIYNRP
DKGGSGGNFVRRAIHEANGRDPKKFKVDNFTTDFATETLTPALKILNDLAPALYDKGAYT
AGNTQSIQLLAQGVVTMVPVWSDQVLQAISQGVLPDTTGLVQLTDLALCGGFSSITVFSN
GANKDAALKLAAFMLTKEMQEAIITEIGGFPAISWDHISDDLRKKYADVIPSTIPTFPGG
DWEKAIADGWYRNVAPGISRT
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgaatagacgcgaatttctgatcacatcgtcggctgcagccggtctgctggcgcttccg
cgtttcgcatcggctgcggccggcacgatcgatctctacagcggttcggatgccaacatc
gtcgacctctggaacaacgtcatccgcccggccttcgaaaaggcgcatccgggtgttgcc
ctgaaggtgaccgatgccggcgataataatggcctgcgcgccatcgccgaccgtgcgctc
gcggcgctgaagacgaagaccgatccgcaggccgaccttttcgaacaattcgatccccgc
ctgccatccggcggcatcgatgccgggctctgggtcaagttctccgccgagaacatcgag
ggctacgatcatatcaacccgcttgccttcgataccccctactcccttccctatcgcggt
tcgcaggtgcttctcgcctatgacacgaccaagcttgatccgaaggatgcgccgaagagc
tgggatcagctcactgcctggatcaaggccaatccgggccagttcatctacaaccgtcct
gacaagggcggttcgggcggaaacttcgtccgccgcgcgatccatgaggccaatggccgc
gatccgaagaagttcaaggtcgacaatttcaccaccgactttgccactgagacgctgacg
ccggccttgaagatcctcaacgacctcgcgcctgcgctctatgacaagggcgcctatacg
gccggcaacacccagtcgatccagttgctcgcccagggcgtcgtcaccatggtgccggtc
tggtcggaccaggtgctgcaggcgatctcccagggtgtgctgcctgatacgaccggcctc
gtgcagcttaccgatcttgccctttgcggcggcttctccagcatcaccgtgttctcgaac
ggcgccaacaaggatgcggccctcaagcttgccgcattcatgctgacgaaggaaatgcag
gaagcgatcatcaccgagatcggcggcttcccggctatttcctgggaccacatttccgac
gatcttcgcaagaaatatgccgacgtcattccctcgaccatcccgactttcccgggtggc
gattgggaaaaggcgatcgccgacggctggtaccgcaacgttgctccgggcatcagccgc
acctga
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