Rhizobium indicum: FFM53_034260
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Entry
FFM53_034260 CDS
T07009
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
rii
Rhizobium indicum
Pathway
rii00260
Glycine, serine and threonine metabolism
rii00460
Cyanoamino acid metabolism
rii00630
Glyoxylate and dicarboxylate metabolism
rii00670
One carbon pool by folate
rii00680
Methane metabolism
rii01100
Metabolic pathways
rii01110
Biosynthesis of secondary metabolites
rii01120
Microbial metabolism in diverse environments
rii01200
Carbon metabolism
rii01230
Biosynthesis of amino acids
rii01240
Biosynthesis of cofactors
rii04981
Folate transport and metabolism
Module
rii_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
rii00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
FFM53_034260
09102 Energy metabolism
00680 Methane metabolism
FFM53_034260
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
FFM53_034260
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
FFM53_034260
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
FFM53_034260
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
FFM53_034260
Enzymes [BR:
rii01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
FFM53_034260
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
DegT_DnrJ_EryC1
Beta_elim_lyase
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
QKK21458
LinkDB
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Position
pPR12A204:complement(192204..193472)
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AA seq
422 aa
AA seq
DB search
MFDRLSQTTVSDVAVASAIAEELERQKTQIELIASENIVSRDVLAAQGSVLTNKYAEGYP
GKRYYGGCEFVDKVEQVAIDRLKQLFGAEFANVQPHSGAQANQAVFLALLQPGDRIMGLS
LAHGGHLTHGSPVTMSGKWFDVVSYEVDADTHLIDMEKVREKALETKPKLIVAGASAYPR
QIDFAGFRKIADEVGAYLMVDMAHYAGLIAGGKYPNPVPHAHIVTSTTHKTLRGPRGGVI
LTNDAELAKKLNSAVFPGNQGGPLMRVIAAKAVAFGEALRPEFADYAGQVISNAQALARV
LKDGGLGIVSGGTDSHMVLVDLRPKGVTGKVAEIALERAGLTCNKNAIPNDPEKPFVTSG
IRLGSSAGTTRGFREAEFEKIGVLILTVIDALSQNPEGIAESEAEVRTQVCALCEAFPIY
GS
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaccgtttgtcacaaaccaccgtttccgacgtggcggttgccagcgccatcgcc
gaagaacttgagcggcagaagacccagatcgagctgatcgcttcggagaacatcgtttct
cgggacgttctggcggcgcaaggatcggtgctgacaaacaaatatgccgagggctaccca
gggaaacgctactacggcggctgcgaattcgtcgacaaggtcgagcaggtggccatcgac
cggctgaagcagctcttcggagcagaattcgcgaatgtgcagccgcattccggcgcgcag
gccaatcaagcggtcttccttgcgcttctgcagcccggagatcggatcatgggtctgtcg
ctcgcccatggcgggcacctcacccacggatcgccggtgaccatgtcgggtaaatggttc
gatgtggtctcgtatgaagtcgatgccgacacacatctcatcgacatggaaaaggtccgc
gaaaaggctctggagacgaagccaaagttgatcgtcgcaggtgcctcggcctatcctcgc
cagatcgactttgccgggttccgcaagatcgccgacgaggtcggggcctatttgatggtc
gacatggcccactacgccggtctgatcgcaggcggcaaatacccaaacccggtaccccac
gcccatatcgtcacctcgacgacccataagaccctgcgcgggccgcgcgggggtgtcatc
ctgaccaatgatgccgaactggcgaagaaactgaactccgctgtgttccccggcaatcag
ggcggccctctgatgcgtgtcattgctgccaaggccgtggcatttggtgaagcgctgcgg
cctgagtttgccgattacgccggccaggtcatctccaatgcccaagccctggcaagagtt
ctgaaggacggtggcctcgggatcgtttcgggtggtacggacagtcacatggtcctggtt
gatctgcgcccgaaaggcgtaaccggcaaggtggctgaaattgcgctggaacgcgcgggc
ctgacctgcaacaagaatgcaatcccgaacgatccggaaaagcccttcgttacctcaggt
attcgtttggggagttcggccggaaccacgcgcggcttccgtgaagccgagttcgaaaag
atcggcgtgctgatcctgactgttatcgatgcgctgtcgcagaacccggagggcatcgcc
gagtccgaggcggaggtgcgcacacaagtctgcgctttgtgcgaggcgtttccgatctat
ggttcataa
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