Romboutsia ilealis: CRIB_1801
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Entry
CRIB_1801 CDS
T09982
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
ril
Romboutsia ilealis
Pathway
ril03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ril00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CRIB_1801
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ril03019
]
CRIB_1801
03016 Transfer RNA biogenesis [BR:
ril03016
]
CRIB_1801
Enzymes [BR:
ril01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
CRIB_1801
Messenger RNA biogenesis [BR:
ril03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CRIB_1801
Transfer RNA biogenesis [BR:
ril03016
]
Prokaryotic type
tRNA degradation factors
CRIB_1801
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
KH_1
PNPase
KH-I_KHDC4-BBP
S1_2
Mug135_C
DUF7266
DUF4191
Motif
Other DBs
NCBI-ProteinID:
CED94408
UniProt:
A0A1V1I2H2
LinkDB
All DBs
Position
1:complement(1779688..1781808)
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AA seq
706 aa
AA seq
DB search
MFEHKIFTMDLAGRELSVEIGKIAELASGSAIIRYGETMVMVNVSKSAKPRDGIDFFPLS
VDYEEKLYSVGKIPGGFLKREGKPSEKAILTSRLIDRPIRPLFPKGFRNDVQVVATVLSV
DQDCTPDIVAMIGSSIALSISDIPFNGPTGSVLIGLVDGAFVVNPTAEQREKSSLHLVVS
GTKDAIMMVEAGGEEIPDALMLEAILFAHEEIKKVVAFIEEITAEVGKEKMEVVLFKADE
EVEKAVREFATDKMKEAVKTIEKLERMEKMDAVKAETFEKFEELLEDYGVDIEETLQAII
KEEVRKLIVHENIRPDNRGLEEIRPIWCDNGFIPRAHGSGLFTRGQTQVMSIATLGALGD
VQILDGLDEEESKRYMHHYNFPAYSVGEARPSRGPGRREIGHGALAERALVPVLPSKEEF
PYAIRVVSEVLSSNGSTSQGSVCGSTLSLLDAGVPLKDMVAGIAMGLIKHDDKVAVLSDI
QGMEDHLGDMDFKVAGTEKGITAIQMDIKIAGIDKEILTRALTQAKAGRIHILNEMRKTI
SAPKPELSKYAPKIITMNINPDKIRDVIGPGGKVITKIIEETGVKIDIEQTGEVFIAGID
ADMIKLAQKKINDIVAEAEVGQTYTGKVTRIMNFGAFVEILPGKEGLLHISHIAHERVAK
VEDVLNIGDEVEVKVTEIDEKGRVNLSRKVLLPKPEKSDKDKKEEK
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaacataaaatatttacaatggatttagcaggaagagagctttctgttgaaata
ggaaagatagcagaacttgctagcggaagtgccataattagatacggggaaactatggtt
atggtaaatgtttcaaaatcagcaaaaccacgagatggaatagatttctttcctctaagt
gttgattatgaagaaaaattatattcagtagggaaaatacctggaggatttttaaaaaga
gaaggtaagccttcagaaaaggcgatattaacgtcaagacttatagatagaccgataaga
ccattattcccaaaaggatttagaaatgatgtacaagtcgttgctacagttttatcagta
gatcaagattgtacaccagacatagttgctatgatagggtcctctatagctttatctata
tctgatataccttttaatggtcctacaggatctgttttaataggattagttgatggagca
tttgttgttaacccaacagcagaacaaagagaaaagagttctcttcatctagtagtatca
ggaactaaagatgctataatgatggttgaagctggtggagaagaaataccagatgcatta
atgcttgaagctatactatttgcgcatgaagaaattaaaaaagtggtagcatttatagaa
gaaataactgctgaagttggaaaagagaaaatggaagtagttctatttaaagctgacgaa
gaggttgaaaaagcagttcgtgaatttgctacagacaaaatgaaagaagctgtaaagact
atagaaaagcttgaaagaatggaaaaaatggatgctgttaaagctgaaacatttgaaaag
ttcgaagagttattagaagattacggagtagatatagaagaaacacttcaagctataata
aaagaagaagtaagaaaattaatagtacatgagaatataagacctgataatagaggatta
gaagagataagaccaatatggtgtgataacggatttatacctagagctcatggttcagga
ttatttacaagaggtcaaactcaagtaatgtctatagcgacacttggagcattaggtgat
gttcaaatattagatggattagatgaagaagaaagtaagagatatatgcatcattacaat
ttcccagcatatagtgttggtgaagctagaccatcaagaggaccaggaagaagagaaata
ggacatggagcacttgctgaaagagccttagtgcctgtacttccatcaaaagaggaattc
ccatatgcaataagagtagtatcagaggtattaagttctaatggttctacatctcaaggt
agtgtatgtggttcaacattatctttacttgatgctggtgtacctttaaaagatatggta
gcaggtattgctatgggacttataaagcatgatgataaagtggcggtactttctgatata
caaggtatggaagatcacttaggagatatggactttaaagtagcaggaacagaaaaaggt
ataactgctatacaaatggatataaagatagctggtatagataaagaaatattaactaga
gctttaactcaagctaaagcaggtagaatacatatattaaatgaaatgagaaaaacaata
tcagctccaaaaccagaattatctaagtatgctcctaagataataacaatgaacataaat
ccagataaaataagagacgttataggacctggtggaaaagttataactaagataatagag
gaaactggagttaagatagatatagaacaaactggagaagtatttatagcaggaatagat
gctgatatgataaagcttgcacaaaagaaaataaacgatatagtagctgaagctgaagta
ggacaaacttatactggtaaagttacaagaataatgaactttggtgcatttgttgaaata
cttcctggtaaagaaggattacttcatatatctcatatagctcacgaaagagtagctaaa
gttgaagatgtattaaatataggtgatgaagtagaggttaaagttactgaaatagatgaa
aaaggaagagtaaacttatctagaaaagtattattacctaagcctgaaaaatctgataaa
gataaaaaagaagaaaaataa
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