KEGG   Romboutsia ilealis: CRIB_185
Entry
CRIB_185          CDS       T09982                                 
Name
(GenBank) RNA polymerase sigma-54 factor
  KO
K03092  RNA polymerase sigma-54 factor
Organism
ril  Romboutsia ilealis
Pathway
ril02020  Two-component system
ril02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:ril00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    CRIB_185
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    CRIB_185
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ril03021]
    CRIB_185
Transcription machinery [BR:ril03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     CRIB_185
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID HTH_21 HTH_38 Arg_repressor HTH_19
Other DBs
NCBI-ProteinID: CED92943
UniProt: A0A1V1HYG0
LinkDB
Position
1:201947..203380
AA seq 477 aa
MKYFADTSLKRSEFLFSLYVKRGRLLGEDMNFNNSLELTQSQKLIMTTQLKQSLSILNMS
KLELEEEIKKESEDNPLLEVEKNNEINWEEYIKDIGNSRPIDKSELYYNSDNDLNLDNII
KNTPNLYENLHLQINLYKINKKDKEICDYIIDSLDDDGYLRIDEKEIINEFNINKDRFEN
CLEIIQQLEPIGVGARNLSECLIIQIRNLGIDNKLLETIVYKDLDLIGKNKYKEITKKYN
ISMQKCINIIDIIKTLDPKPGRICSVENSVYVQPDVIVEKIEDEFVVYINESDNLKIRIS
NFYEEILKNSKYDESAKNYIKEKLNSATRLVKSIESRKSTILKIAQEIVKNQKDFFEKGE
KYIKPMKMKDIAQNLDFHESTISRGVNEKYMMTPFGLYKFKYFFSNALETNDDNLTSSVS
IKKIIQEMIKSENKKKPLSDDQISKILNDRGINVARRTVAKYREELGVLSSSKRKLY
NT seq 1434 nt   +upstreamnt  +downstreamnt
atgaagtatttcgccgacacgtcgctcaagcgaagcgaatttttatttagcttatatgta
aaaagaggaaggttattaggtgaagatatgaattttaataatagtctagaattgactcaa
tctcagaagcttataatgactacacagttaaaacaatctttaagtatattaaatatgagt
aagttagagttagaggaagaaataaaaaaggaatcggaagataatccattattagaagta
gagaaaaataatgaaataaattgggaagaatacataaaagatattgggaattcacgacca
attgataaaagtgaattatattataattcagataacgatttaaatttagataatattata
aaaaatacacctaatttatatgaaaatttacatttacaaattaatttatataaaattaac
aaaaaagataaagaaatttgtgattatataatagatagtttagatgacgatggatattta
agaatagatgaaaaagagataataaatgaatttaatataaataaagatagatttgaaaac
tgtttagaaataatacaacaattggaacctattggtgtaggagctagaaatttatcagag
tgtttgataatacaaattagaaatttaggaattgataataagttattagagactatagta
tataaagatttagatttaattgggaaaaataaatataaagaaataactaaaaaatataat
atatctatgcaaaaatgtataaatattatagatataataaaaacattagatccaaagcca
gggagaatatgttctgttgaaaatagtgtatatgttcaacctgatgttattgtggaaaaa
atagaagatgaatttgtagtttatataaatgaaagtgacaatttgaaaattagaataagc
aatttctatgaagaaattctaaaaaattcaaagtatgatgaaagtgctaaaaattatata
aaggaaaaattaaattctgcaacaagactagttaaaagtatagaaagtagaaaatctaca
atattaaaaatagctcaagaaattgtaaaaaatcaaaaggatttttttgaaaagggagag
aagtatattaagcctatgaaaatgaaagatattgcacaaaacttagattttcatgagtct
actattagcagaggtgttaatgaaaaatacatgatgactccatttgggctatataaattt
aaatatttctttagtaatgcattagaaactaatgatgacaacttaacatctagtgttagt
ataaaaaaaataatacaggagatgataaagtctgaaaataagaaaaaaccattaagtgac
gatcaaatatcgaagatactcaatgacagaggtattaatgttgctaggagaacggttgcg
aaatatagagaagaacttggcgtattatcatcaagtaaaagaaaactgtattag

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