Romboutsia ilealis: CRIB_185
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Entry
CRIB_185 CDS
T09982
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
ril
Romboutsia ilealis
Pathway
ril02020
Two-component system
ril02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ril00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CRIB_185
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CRIB_185
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ril03021
]
CRIB_185
Transcription machinery [BR:
ril03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CRIB_185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_21
HTH_38
Arg_repressor
HTH_19
Motif
Other DBs
NCBI-ProteinID:
CED92943
UniProt:
A0A1V1HYG0
LinkDB
All DBs
Position
1:201947..203380
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AA seq
477 aa
AA seq
DB search
MKYFADTSLKRSEFLFSLYVKRGRLLGEDMNFNNSLELTQSQKLIMTTQLKQSLSILNMS
KLELEEEIKKESEDNPLLEVEKNNEINWEEYIKDIGNSRPIDKSELYYNSDNDLNLDNII
KNTPNLYENLHLQINLYKINKKDKEICDYIIDSLDDDGYLRIDEKEIINEFNINKDRFEN
CLEIIQQLEPIGVGARNLSECLIIQIRNLGIDNKLLETIVYKDLDLIGKNKYKEITKKYN
ISMQKCINIIDIIKTLDPKPGRICSVENSVYVQPDVIVEKIEDEFVVYINESDNLKIRIS
NFYEEILKNSKYDESAKNYIKEKLNSATRLVKSIESRKSTILKIAQEIVKNQKDFFEKGE
KYIKPMKMKDIAQNLDFHESTISRGVNEKYMMTPFGLYKFKYFFSNALETNDDNLTSSVS
IKKIIQEMIKSENKKKPLSDDQISKILNDRGINVARRTVAKYREELGVLSSSKRKLY
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgaagtatttcgccgacacgtcgctcaagcgaagcgaatttttatttagcttatatgta
aaaagaggaaggttattaggtgaagatatgaattttaataatagtctagaattgactcaa
tctcagaagcttataatgactacacagttaaaacaatctttaagtatattaaatatgagt
aagttagagttagaggaagaaataaaaaaggaatcggaagataatccattattagaagta
gagaaaaataatgaaataaattgggaagaatacataaaagatattgggaattcacgacca
attgataaaagtgaattatattataattcagataacgatttaaatttagataatattata
aaaaatacacctaatttatatgaaaatttacatttacaaattaatttatataaaattaac
aaaaaagataaagaaatttgtgattatataatagatagtttagatgacgatggatattta
agaatagatgaaaaagagataataaatgaatttaatataaataaagatagatttgaaaac
tgtttagaaataatacaacaattggaacctattggtgtaggagctagaaatttatcagag
tgtttgataatacaaattagaaatttaggaattgataataagttattagagactatagta
tataaagatttagatttaattgggaaaaataaatataaagaaataactaaaaaatataat
atatctatgcaaaaatgtataaatattatagatataataaaaacattagatccaaagcca
gggagaatatgttctgttgaaaatagtgtatatgttcaacctgatgttattgtggaaaaa
atagaagatgaatttgtagtttatataaatgaaagtgacaatttgaaaattagaataagc
aatttctatgaagaaattctaaaaaattcaaagtatgatgaaagtgctaaaaattatata
aaggaaaaattaaattctgcaacaagactagttaaaagtatagaaagtagaaaatctaca
atattaaaaatagctcaagaaattgtaaaaaatcaaaaggatttttttgaaaagggagag
aagtatattaagcctatgaaaatgaaagatattgcacaaaacttagattttcatgagtct
actattagcagaggtgttaatgaaaaatacatgatgactccatttgggctatataaattt
aaatatttctttagtaatgcattagaaactaatgatgacaacttaacatctagtgttagt
ataaaaaaaataatacaggagatgataaagtctgaaaataagaaaaaaccattaagtgac
gatcaaatatcgaagatactcaatgacagaggtattaatgttgctaggagaacggttgcg
aaatatagagaagaacttggcgtattatcatcaagtaaaagaaaactgtattag
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