Romboutsia ilealis: CRIB_2146
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Entry
CRIB_2146 CDS
T09982
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ril
Romboutsia ilealis
Pathway
ril03420
Nucleotide excision repair
ril03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ril00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CRIB_2146
03430 Mismatch repair
CRIB_2146
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ril03400
]
CRIB_2146
Enzymes [BR:
ril01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CRIB_2146
DNA repair and recombination proteins [BR:
ril03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CRIB_2146
MMR (mismatch excision repair)
Other MMR factors
CRIB_2146
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
Viral_helicase1
UvrD_C_2
DEAD
AAA_12
PcrA_UvrD_tudor
SNF2-rel_dom
AAA_11
Terminase_6N
Motif
Other DBs
NCBI-ProteinID:
CED94749
UniProt:
A0A1V1I3P3
LinkDB
All DBs
Position
1:complement(2136557..2138599)
Genome browser
AA seq
680 aa
AA seq
DB search
MISIDKLNENQLKAVEHIDGPCMVLAGPGSGKTRVITYRIANMIVNKNIKPTSILAISFT
KASSIEMKNRALALSNDFRMNKVTYGTFHSVFFRILRYFENYNIESILDEKTKRIGLKSI
LKGLNIENSDDDETIGQVINEISYVKNELMDKRDFKSEVLTNDEFIKVYNFYEEYKQQMN
KIDFDDMLIKTYELLKHNKAALDRVRSVYRYILVDEFQDINKVQFEALKLIANPNNNIFV
VGDEDQSIYGFRGSRPDFLLEFEEYFSNTTKVLLDINYRSKGEIIDIANRLIEKNTNRYE
KVIKCGQGNGAKVNYISPEDSEEEAVYIAKDIKDKIQEMYTEYTDFAVIYRTNIQSRALV
DVFMDMRIPFVVKDSIVTIYDHWAAQDILAYLRIGVNPNSNKDWIRIINKPFRYISKDNL
NLIKDEPDFINSLINKCDLHPKQVKTINDLDIDISYVKGLSPKNAISYIRTTLDYDRYIL
DYCANRKIKTNGLIEILNELESSATNFKTIQEYLEHIERVKSELVDNKNNKETDGVIFTT
MHSAKGLEFKNVYIIGANEGTIPHEKSYDIDDEAKKNDQIEEERRLMYVAITRAEENICI
SSPVNKYGKRVSKSRFVEDIKAPTKKEMDSISIGDKIYHKKFKEGTIVEKNGDSIKIRFK
DRDRALNSKVCLTKRIIWKI
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atgataagtatagataaattaaatgaaaatcaattaaaggctgtagaacacatagatgga
ccttgtatggtgcttgcagggccaggttcaggaaagactagagttataacatatagaata
gctaatatgattgtaaataaaaacataaagcctacaagcatacttgcaataagttttaca
aaagcttcatctatagaaatgaaaaatagagcattagctttaagtaatgactttagaatg
aataaggttacatatggaacatttcattccgtgttttttaggatattaaggtattttgaa
aattataatattgaaagtatcctagatgaaaaaacaaagaggattggattaaagagcata
ttaaagggattaaatatagaaaattcagatgatgatgaaactattggacaagttataaat
gaaatttcatatgtgaaaaatgaattgatggataaaagagattttaaatcagaggtattg
actaatgatgaattcataaaggtatataatttttatgaagaatacaaacaacaaatgaat
aaaatagactttgatgatatgttaataaaaacatatgaattattaaaacataataaggca
gctttagatagagtgagaagtgtttatagatatattcttgtggatgagtttcaagatata
aataaggttcaatttgaagcattaaagttaatagcaaatccaaataataatatatttgta
gtaggagatgaagatcaaagtatctatggatttaggggatctagaccagatttcttatta
gaatttgaagagtatttttctaatacaacaaaagtattattggatattaattatagatct
aaaggtgaaataatagatatagctaatagattaatagaaaaaaatacaaatagatatgag
aaagttataaaatgtggtcaaggcaatggtgctaaggtaaattatatttcgcccgaagat
tcagaggaagaggctgtatatatagcaaaagatataaaagataagattcaggaaatgtat
acggagtatactgattttgcagtaatatatagaactaatatacaatcaagagctttagtt
gatgtatttatggatatgagaatcccatttgtagttaaagactcaatagttactatatat
gaccactgggctgctcaagacatacttgcttacttaagaataggagttaatccaaattct
aataaagattggataagaattataaataaaccttttagatatatttctaaagacaattta
aatttgataaaggatgaaccggattttataaattcattgattaataagtgtgacttacat
cctaagcaagtgaaaactataaatgatttagatatagatataagttatgtaaaggggcta
agtcctaaaaatgcaatatcatatattagaacaactttagattatgatagatatattttg
gattattgcgcgaatagaaaaataaaaacgaatggacttatagaaatactaaatgagctt
gaaagttcagctacaaactttaaaactatacaagaatatttagagcatatagaaagagta
aagtctgaattagtagataataaaaataacaaagaaacagatggtgttatttttacaact
atgcacagcgcaaaaggattagagtttaaaaatgtttatattataggtgctaatgaaggg
acaataccacatgaaaaatcttatgatatagatgatgaagcaaagaaaaatgatcaaata
gaagaagagagaagacttatgtatgtagcaataactagagcggaagaaaatatatgtata
agttcgccagttaataagtatggtaaaagagtttctaaatcaaggtttgtagaagatata
aaagctccaactaaaaaagaaatggatagtataagtataggagataaaatatatcacaaa
aaatttaaagaaggtaccatagtagaaaagaatggtgattctatcaaaataagatttaaa
gatagagatagagcgttaaattcaaaggtatgtttaacaaagagaataatatggaaaata
taa
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