Romboutsia ilealis: CRIB_2336
Help
Entry
CRIB_2336 CDS
T09982
Name
(GenBank) Helicase, RecD/TraA
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
ril
Romboutsia ilealis
Pathway
ril03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ril00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CRIB_2336
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ril03400
]
CRIB_2336
Enzymes [BR:
ril01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
CRIB_2336
DNA repair and recombination proteins [BR:
ril03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CRIB_2336
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
Viral_helicase1
AAA_11
HHH_5
PIF1
Helicase_RecD
AAA_22
nSTAND3
DEAD
T2SSE
SLFN-g3_helicase
HHH_2
PhoH
UvrD-helicase
ATPase_2
TrwB_AAD_bind
AAA
SRP54
AAA_28
HHH_3
NPHP3_N
KTI12
DNA_pol_lambd_f
AAA_14
ABC_tran
AAA_5
AAA_24
cobW
RsgA_GTPase
Ribosomal_S13
AAA_7
AAA_29
Thymidylate_kin
ATP_bind_1
MeaB
TraI_hel_assoc_N
AAA_16
HerA_C
FtsK_SpoIIIE
DUF5497
Motif
Other DBs
NCBI-ProteinID:
CED94934
UniProt:
A0A1V1I5Q5
LinkDB
All DBs
Position
1:complement(2363377..2365599)
Genome browser
AA seq
740 aa
AA seq
DB search
MERIEGMISDIVFKNEDNGYTIAHLANSDNEIVIVGCMPTLSVGESIEVEGKWVNHKTYG
TQFEVNKFMPVTPSSLEGIYVYLSSGMIHGIGEKMAKRIVDKFGVDTLNIIQNAPERLKE
VDGIGSKKINQIVKSYEENRELRNIIIELSPYGISPNYCMRIYKKYKNKAIKIINENPYK
LAEDIRGIGFKIADNIANKIGIEKDSKDRVSQGILYTLNQSLGNGHTYLPKNILLQEASK
LLEVEFTIIEECIISLAYDQKVHIEKVNGEQLVYLIPYYLSENGVCKQIIKLAQFEFENL
NIDIEEEIKYVEEENNIKLAQNQSLAVKEAIENGVVIITGGPGTGKTTTINTIIKIFENN
KKEVILAAPTGRAAKRMSETSGKEAKTIHRLLEMGYATDSEELQFMKNEEDPIAADVIII
DEVSMVDILLMYSLLRAIKPGTRVILVGDSDQLPSVGAGNVLKDMIESNVINVVRLNEIF
RQARESMIVVNAHKINKGEPLFLNSKGKDFFFLRKGTNEEVMQEIIGLVNERLPKFYKLD
KLKDIQILSSMRKGDLGVTNLNNELQKYLNPPQKFKVEENFQKRIFRVGDKVMQIKNNYT
KKWENEDKSDSGEGIYNGDIGYIYHIDKDNKKIYVLFDQIKIVDYGYDELDELDHSFCTT
IHKSQGSEFPVVVIPITWAPPMLLSRNLLYTAVTRAKKLVVLVGDVKYLEYMIKNNRIND
RYSNLSYKLNKFREEGLLIK
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggaaagaatagaaggaatgataagtgacatagtatttaaaaatgaagataatggatat
actatagctcacttagctaactcggacaatgagattgttatagtaggatgtatgcccact
ttatcagtaggagagagtattgaagtagaaggtaagtgggtaaatcataaaacgtatgga
acacaatttgaagtaaataaatttatgcctgtaactccatcttctctagagggaatatat
gtatacctatcatcaggaatgatacatggtataggagagaaaatggctaaaaggatagta
gataagtttggagtagacactttaaacataatacaaaatgctcctgaaaggctaaaggaa
gtagatggcattggaagtaagaaaataaaccaaatagtaaagagttacgaggaaaataga
gaacttagaaatattataatcgagctatcaccatatggaatttctccaaactactgtatg
agaatatataaaaaatataaaaataaagcaattaaaataataaatgaaaatccatataag
ttagcagaggatataagaggaattggattcaaaatagcagataatattgctaataagata
ggtatcgaaaaagactctaaagatagagtatcacaaggaatcttatacacgctaaatcaa
tcattaggaaatggacacacctatcttccaaagaatattcttttgcaagaagcatcaaaa
ttactagaagtagaatttacaataatagaagaatgtataatatcattagcatatgatcaa
aaagttcatatagaaaaagttaatggagagcaactagtttatctaataccatattattta
tctgaaaatggagtttgtaaacaaataataaaattagcacagtttgaatttgaaaactta
aatatagatatagaagaagaaattaagtatgtagaggaagaaaataatataaagttagca
caaaatcaatcattagcagtaaaagaagctatagaaaatggagtagttataattacaggt
ggacctgggactggtaagactactactataaatacaataatcaaaatatttgaaaataat
aaaaaagaagtcatactagcagctccaacaggaagagctgctaaaaggatgagtgagaca
tcaggaaaggaagcaaaaactatacatagattactggaaatgggatatgcaacagacagt
gaagaattacagtttatgaaaaatgaggaagatcctatagctgcagatgtaataattata
gatgaagtatctatggtagatatcttacttatgtatagtttacttagagctataaaacca
ggaaccagagttatattagttggagatagcgaccagctaccatcagtaggtgcaggaaat
gttttaaaagatatgattgagtcaaatgtaataaatgtagttagattaaatgagatattt
agacaagctagagagagcatgatagtagtaaatgctcataaaataaacaaaggagaacca
ttgtttttaaatagcaaaggtaaagactttttctttttaagaaaaggtactaacgaagaa
gttatgcaagaaattataggactagtaaatgagaggcttccaaaattttataaactagat
aaattaaaagatatacaaatactttcatctatgagaaaaggtgatttaggtgtgacaaac
ttaaataatgaattacaaaaatatttaaatccacctcagaaatttaaagtagaggaaaat
tttcaaaagcgtatatttagagtaggcgataaagttatgcagataaaaaataactatacg
aaaaaatgggaaaatgaagataaaagtgatagtggtgaaggtatatacaatggagatata
ggatatatttatcatattgataaagataataaaaaaatttatgttttatttgatcaaata
aaaattgtagattatggatatgatgaattagatgagctagatcatagtttttgtactact
atacataaaagtcaaggaagtgagtttcctgtagtagttatacctataacatgggctccc
ccaatgttacttagtagaaatttactatatacagctgtaacaagagctaaaaaactagtt
gtattagttggagatgtaaagtacttagaatatatgataaaaaacaatagaattaatgat
agatattctaacttatcatataaattaaataaatttagagaagaaggattattgataaaa
taa
DBGET
integrated database retrieval system
