Romboutsia ilealis: CRIB_2479
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Entry
CRIB_2479 CDS
T09982
Name
(GenBank) DNA-directed RNA polymerase subunit beta prime/gamma
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
ril
Romboutsia ilealis
Pathway
ril03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ril00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CRIB_2479
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ril03021
]
CRIB_2479
03400 DNA repair and recombination proteins [BR:
ril03400
]
CRIB_2479
Enzymes [BR:
ril01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CRIB_2479
Transcription machinery [BR:
ril03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CRIB_2479
DNA repair and recombination proteins [BR:
ril03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CRIB_2479
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
RPOC_hybrid
Motif
Other DBs
NCBI-ProteinID:
CED95069
UniProt:
A0A1V1I4I4
LinkDB
All DBs
Position
1:2540603..2544091
Genome browser
AA seq
1162 aa
AA seq
DB search
MFELNNFESIKIALASPEKIRQWSRGEVKKPETINYRTLKPEKDGLFCERIFGPQKDWEC
HCGKYRRVRYKGVVCDRCGVEVTKSKVRRERMGHIELAAPMSHIWYFKGIPSRMGLLLDM
SPRSLEKILYFASYVVVDPGETGLNEKQLLTEKEYRTAVDKYGYNTFTVGMGAEAVKQLL
QNIDLEKESKELRADLKDSTGQKRVRTIRRLEVVEAFKKSGNKPEWMILDAIPVIPPDLR
PMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLELGAPDIIVRNEKRMLQEAVDALIDNG
RRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPELKFYQCGLPK
KMALELFKPFVMDKLVKEGFAHNIKSAKSIVEKVKPEVWDVLEDVIKSHPVLLNRAPTLH
RLGIQAFEPVLVEGKAIKLHPLVCTAYNADFDGDQMAVHVPLSVEAQAEARFLMLSVNNI
LAPKDGTPITTPSQDMVLGCYYLTIEAQGGEKGTGTVFKDFNEMLLAYQNQAVQLHSLVK
MRVVLEDGRSSIVESTVGRFIFNENIPQDLGFVDRSVDPFGLEIDFLVDKKALGKIIDKC
FRKHGNTETAVLLDHIKSLGFKFSTRGGITVAVADMKIPEAKKGYITEAEEKVDKYEKAY
RRGLISDEERYERVIETWTETTEKVTDALMAGLDRLNNIYIMAHSGARGSKNQIRQLAGM
RGLMANASGKTVEVPVKSNFREGLSVMEYFTSSHGARKGLADTALRTADSGYLTRRLVDV
SQDVIVREVDCGTTETTETFAIKDGNEVIEVLYDRIVGRYTIDPIVNPTTGEVIVEADSM
IKEDEAEKIIAAGIETVQIRTVLNCKTNHGVCSKCYGRNLATGKEVNIGEAVGIIAAQSI
GEPGTQLTMRTFHTGGVAGGDITQGLPRVEELFEARKPKGLAVITEITGRVEIDETGKRK
EISIVPENGETEVYAIPYGSRIRVKHGQMVEAGDPLTQGSINPHDIVRVKGIGGVQDYIV
KEVQRVYRMQGVDVNDKHIEVIVRQMLSKVKVEDPGDTELIPGGYEDVLTFDKCNEEAIA
QGLKPAVAKRVLLGITKASLATESFLSAASFQETTRVLTEAAIKGKEDHLIGLKENVIIG
KLIPAGTGMKRYKNIAVEKIQD
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
ttgtttgaattaaacaattttgagtcgataaaaatagcactagcttctccagagaaaata
agacaatggtctagaggagaagtaaaaaaacctgaaacaataaactaccgtacactaaaa
ccagaaaaagatggtctgttctgtgagagaatatttggacctcaaaaagactgggaatgt
cactgtggtaaatacagaagagtaagatataaaggtgtagtttgtgatagatgtggagta
gaagttacgaaatctaaagtaagaagagaaagaatgggacatatagagctagcagctcct
atgtctcatatctggtacttcaaaggtataccaagtagaatgggtcttttacttgatatg
tctccaagatctttagaaaaaatattatactttgcttcatatgttgtagtggacccagga
gaaactgggttaaatgaaaagcagcttttaacagaaaaagaatatagaactgctgttgat
aagtatggatacaatactttcacggtaggtatgggagctgaagctgttaagcaattacta
caaaatatagacctagaaaaagaaagcaaagaattaagagctgacttaaaagatagtaca
ggtcaaaaaagagttagaacaataagaagattagaagtggtagaagcatttaaaaagtct
ggaaataaaccagagtggatgatattagatgcgataccagtaatacctccagatttaaga
ccgatggttcaacttgatggaggaagatttgcaacttctgacttaaatgatttatataga
agagttataaacagaaataacagattaaagagattactagaacttggagctcctgatatc
atagtaagaaatgaaaagagaatgcttcaagaagcagttgatgctttaatagacaatggt
agaagaggtagacctgtaacaggacctggtaacagaccgcttaagtctttatcggatatg
ctaaaaggtaagcaaggacgtttccgtcaaaacttacttggtaagcgtgttgactactca
ggacgttcggttatagttgttggaccagaacttaaattctatcaatgtggtcttcctaag
aagatggctctagaattattcaagccatttgttatggataaattagttaaagaaggtttt
gcacataatataaagagtgctaaatctatagtagaaaaagttaaaccagaagtatgggat
gttttagaagatgttataaagagtcatccagttcttcttaaccgtgcgcctactcttcat
agattaggtatacaggcatttgaaccagtattagttgaaggaaaagctataaagctacat
ccacttgtatgtacagcatacaatgccgacttcgatggtgaccaaatggcggtacacgta
cctttatcagtagaagcacaagcagaagctagattcttaatgttatctgtaaataatata
cttgcacctaaagatggtacgccgataactacgccttctcaggatatggttttaggatgt
tactatttaactatagaagctcaaggtggcgaaaagggaacaggaacagtattcaaagac
ttcaatgaaatgttacttgcttatcaaaaccaagctgttcaattacactctttagtaaaa
atgagagtagttcttgaagatggaagaagttctatagtagaaagtacagtaggtagattc
atatttaatgaaaatatacctcaagacttaggatttgtagatagaagtgtagatccattt
ggattagaaatagacttcttagttgacaaaaaagctttaggtaaaataatagataagtgc
tttagaaagcatggaaatacagaaactgctgtattacttgaccatataaaatctctagga
tttaaattctcaactagaggtggtataacagttgcggttgctgatatgaaaataccagaa
gctaaaaaaggttatataacagaagcagaagaaaaagttgataaatatgaaaaagcatac
agaagaggtctaatatctgacgaagaaagatatgaaagagttatagaaacttggacagaa
acaactgaaaaagttacagatgctctgatggcaggattagacagacttaataatatatat
ataatggcacactcaggagccagaggttctaagaaccagataagacagttagctggtatg
cgtggtctgatggccaatgcatctggtaaaacagttgaggttccagttaaatctaacttc
cgtgaaggtttatcagtaatggaatacttcacatcttcacacggggctagaaaaggtctt
gccgatacagcgcttcgtacagctgactcaggatacttaacaagaagacttgttgatgtc
agccaagatgttatagtaagagaagttgactgtggtacaacagaaactacagaaacattt
gctataaaagatggaaatgaagtaatagaagtattatatgatagaatagtgggaagatat
actatagaccctatagtaaatccaactacaggagaagttatagtagaagctgattctatg
ataaaagaagatgaagctgaaaaaataatagctgcaggaatagaaactgtacaaataaga
acagttcttaactgtaagacaaaccatggggtttgttctaagtgttatggtagaaacctt
gctacaggtaaagaagttaatataggggaagctgttggtataatagctgctcaatcaatc
ggtgaaccaggtactcagcttacaatgcgtacattccatacaggtggggttgccggagga
gatataactcaaggtcttccaagggttgaagaattatttgaagcaagaaaacctaaaggt
ttagctgtcataacagaaataactggtagagttgaaatagacgaaactggtaagagaaaa
gaaataagtatagttcctgaaaatggtgaaacagaagtttatgctataccttatggatca
agaataagagttaagcatggacaaatggttgaagctggggacccattaactcaaggttct
ataaacccacatgacatagtaagagttaaaggtataggtggagttcaagactatatcgtt
aaagaagttcaaagagtttatagaatgcaaggggttgacgttaacgataagcatatagaa
gttatagtaagacaaatgctttcgaaagttaaagttgaggatccaggtgatacagaatta
atcccaggtggatatgaagatgtattaacatttgataagtgtaatgaagaagctatagct
cagggattaaaacctgctgttgctaagagagttttacttggtataactaaggcatctctt
gctacagaatcattcttatcagctgcttcattccaagaaacaactagagtattaacagaa
gctgctataaaaggaaaagaagatcacttaataggtcttaaagaaaatgttataataggt
aagttaataccagcaggaacaggtatgaagagatataaaaacatagctgttgaaaaaatc
caagactaa
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integrated database retrieval system
