Romboutsia ilealis: CRIB_274
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Entry
CRIB_274 CDS
T09982
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
ril
Romboutsia ilealis
Pathway
ril03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ril00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CRIB_274
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ril03019
]
CRIB_274
03009 Ribosome biogenesis [BR:
ril03009
]
CRIB_274
Enzymes [BR:
ril01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CRIB_274
Messenger RNA biogenesis [BR:
ril03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CRIB_274
Ribosome biogenesis [BR:
ril03009
]
Prokaryotic type
rRNA helicases
CRIB_274
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
Glyoxalase
Motif
Other DBs
NCBI-ProteinID:
CED93031
UniProt:
A0A1V1HYI8
LinkDB
All DBs
Position
1:295610..297064
Genome browser
AA seq
484 aa
AA seq
DB search
MNKKFEDFNLDKYIIKALYNLNYKTPSKVQKEVIPRLLKKEDVIVKSKTGSGKTASFGIP
ICENIDIENNNVQALIVVPTRELALQVKDEISNIGRLKKIRCSAIFGKQPIKEQIRELKQ
RVHIVVATPGRIIDHIGRNTINLDDIKYFIIDEADKMLNKGFIEDMEFILNKIPKKSVKG
LFSATIDDDIQYICDKYLKTSNILDIKYNDVFDKSQIIENKIKSSENDKYKNLKSIIYRE
NPTSLIIFCNTKDKVKKLYENMKKDGFLIEELHGDMSQDKRIFAIKDFKNNKFNILISTD
VAARGIHIDDISLVINYDVPRDKENYIHRIGRTGRKDSYGKAITIFTDKDDKYINEIEEY
LGYEIKLLEELNIDDIAEGKIKFEKKSKEILKNRKNKIIDKNIHSEVTKIYINAGKKKKI
RVIDIVGAFSNLPGINNEDIGVVEVQDSCSYVDILNHKGEGLVKKYKEISIKKKIVKLRK
DRQN
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaaaatttgaagatttcaatttagataaatatataataaaagctttgtataat
ttaaactataaaacaccttctaaggtacagaaggaagttatacctagattgttgaaaaaa
gaggatgttatagttaaatctaagacaggaagtggtaaaactgcaagttttggaattcca
atatgtgagaatatagatatagaaaataataacgtacaagctcttatagtagtacctact
agagagttagcacttcaagttaaggatgaaatttctaatataggaagattaaaaaagata
agatgtagtgcaatatttgggaaacaacctataaaggaacaaataagagaactaaaacaa
agagtacatattgtagtggctacaccaggtaggataatcgaccatataggaagaaataca
ataaacttagatgatattaagtattttataatagacgaagcggataagatgcttaataaa
gggtttatagaagatatggaatttatattaaataagatacctaaaaagagtgtaaaagga
ttattttctgcaactatagacgatgatatacaatacatatgcgataaataccttaaaaca
tctaatatattagatataaaatataatgatgtatttgataagagtcaaataattgaaaat
aaaataaagtcatctgaaaatgacaaatataaaaatctaaagagtataatttatagggag
aatccaacatctttaataatattttgtaatacaaaagataaagttaaaaagttgtatgaa
aatatgaaaaaagatggatttttaattgaagaacttcatggagatatgtctcaagataaa
agaatatttgcgattaaggactttaaaaataataagtttaatatacttataagtacagat
gtggctgctaggggtatacatattgatgatatatctttagtaataaactatgatgttcca
cgagataaagaaaattatatccatagaattggtagaactggtagaaaagatagctatgga
aaagcaataactatttttaccgacaaagatgataagtatatcaatgaaatagaagaatat
ctagggtatgaaataaaacttcttgaagagttaaatatagatgatatagcagaaggaaag
ataaagtttgaaaagaaatctaaggagattttgaaaaatagaaaaaataaaataatagat
aaaaatattcatagtgaagtaacaaagatatatataaatgcagggaagaaaaagaaaata
agagttatagatatagtaggagcttttagtaatttaccaggtataaataatgaggatata
ggtgttgttgaagttcaagattcatgttcgtatgtagatatacttaatcataaaggcgaa
ggattagtgaaaaaatataaggaaataagtataaagaaaaagatagtcaaattaagaaaa
gatagacaaaattaa
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