Romboutsia ilealis: CRIB_306
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Entry
CRIB_306 CDS
T09982
Name
(GenBank) Metallo beta-lactamase superfamily protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
ril
Romboutsia ilealis
Pathway
ril03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ril00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CRIB_306
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ril03019
]
CRIB_306
Messenger RNA biogenesis [BR:
ril03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CRIB_306
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
RMMBL
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B_6
Motif
Other DBs
NCBI-ProteinID:
CED93063
UniProt:
A0A1V1HYS8
LinkDB
All DBs
Position
1:342908..344569
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AA seq
553 aa
AA seq
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MIKESLKIIPLGGLGEIGKNITAIEYKDEIIVIDCGISFPDEDMYGIDLVIPDIKYLLDN
KNKVKGLFLTHGHEDHIGAIPYILKQINIPVYGTKLTIGLVKNKLKEHNMLSKSNLNPIR
PGELIKLDELAIEFIRVTHSIAESCALAIHTPIGTVLHTGDFKIDYTPIDGKVMDLNRIA
QLGQEGVLLLMADSTNVERAGHSLSEKIIGETLNRIISNAKGRVIVATFASNIHRMQQIA
DASMIYDRKIVFSGRSMENISNVAMDLGYLHIPEESIIGIEDLNRYPSDKITIITTGSQG
EPMAGLSRIAYGSHRHISIEQDDLFIISASPIPGNDKLVSRVINQLYRKGVEVIYEDLEE
IHVSGHAYKEELKLIHTLVKPKYFMPVHGEYRHLKHHSDLALKLGMDKSNVFTLETGQVL
EISQDKAIATEKVHTGVVFVDGIGVGDVGNIVLRDRRDLARDGMVTIVVAINKETYSIVS
GPDIITRGFIYARESENLINKIKDVAKEEIEICLGNNILEWQVLKGRVRKSVEQLLYHKT
KRRPSVFPIIMDI
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgataaaagaaagtttaaagataataccattaggaggacttggagaaatcggtaagaat
ataactgctatagaatataaagatgaaataatagtgattgattgtggtatatcttttcca
gatgaagatatgtatgggatagacttagtaataccagatataaaatatttacttgataat
aaaaataaagtaaaaggtttgtttttaacgcatggtcatgaagatcacataggagcaatt
ccttatatattaaaacaaataaatatacctgtatatgggactaaacttacaataggatta
gttaaaaacaaattaaaagagcataatatgctatctaaatctaatttgaatccgataaga
cccggtgaattaattaaattagatgaactagctatagaatttataagagtgactcatagt
atagcagaatcatgtgctttagctatacatactcctataggtacagttttacatacaggt
gattttaaaatagattatactccaatagatggaaaggttatggatttaaatagaatagca
cagcttgggcaagaaggagttttacttttgatggcagatagtactaacgtagaaagagca
gggcattctttatctgaaaaaattataggagaaactctaaatagaataatatctaacgca
aaaggtagagttattgtagctacatttgcatcaaatatacatagaatgcaacaaatagca
gatgcatctatgatatatgatagaaaaatagtttttagtggaagaagcatggaaaatata
tcaaatgttgctatggaccttgggtatttacatataccagaagaaagtattataggtatt
gaagatttaaatagatatccaagtgataagatcacaataataactactggtagtcaggga
gagccaatggcagggttatctagaattgcttatgggtcacatagacatatatctatagaa
caagatgatttatttataatatctgcatcaccgataccaggaaatgataagttagtatct
agagtaataaatcaactatatagaaaaggtgtggaagtaatatatgaagatttagaagaa
atacatgtatcaggacatgcatataaagaagaattgaagttaattcatacactagtaaag
cctaaatactttatgcctgtacatggggagtatagacatctaaaacatcatagtgattta
gctttaaaattaggaatggataaatcaaatgtatttacattagaaactggtcaagtttta
gaaatttctcaggataaagctatagcaactgaaaaagtgcacacaggcgttgtatttgta
gatggaataggtgttggagatgtaggtaatatagttttaagagatagaagagacttagct
agagatggtatggttacaatagttgttgctataaataaggaaacatacagtatagtatca
gggccagatattataacaagaggttttatatatgcaagggaatctgaaaatcttataaat
aagataaaagatgtagcaaaagaagagatagaaatttgcttagggaataatatattagaa
tggcaagttttaaaaggtagagttagaaagtctgtagagcaactactttatcataaaaca
aaaagaagaccaagtgtgtttcctataattatggatatttaa
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