Romboutsia ilealis: CRIB_336
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Entry
CRIB_336 CDS
T09982
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ril
Romboutsia ilealis
Pathway
ril03420
Nucleotide excision repair
ril03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ril00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CRIB_336
03430 Mismatch repair
CRIB_336
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ril03400
]
CRIB_336
Enzymes [BR:
ril01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CRIB_336
DNA repair and recombination proteins [BR:
ril03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CRIB_336
MMR (mismatch excision repair)
Other MMR factors
CRIB_336
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_12
AAA_11
DEAD
ResIII
SLFN-g3_helicase
AAA_30
Motif
Other DBs
NCBI-ProteinID:
CED93093
UniProt:
A0A1V1HYV6
LinkDB
All DBs
Position
1:383881..386091
Genome browser
AA seq
736 aa
AA seq
DB search
MNNINYREDQLPIISYENGTMAVPAVPGAGKTFIVTNLVAKLLCENKHKGGKILILTYMN
SAVSNFKGRIKKILQDNEIKEESSYEVMTIHSLAVKIIKEKPEIVMLNDEFNIADDLQKN
IILNECINNFKLNGGQRAFVWFLKDQKDNEWKDRMLDAWENGFYDLVGNAIGELKYNDIS
PFDLEKIIDSDYKGILKIILPIYKDYDRKLKQYGLLDYDDILILAHKALTLDEGLRNKFQ
SRYKYIFEDECQDSNEIQGKIIKLISKENNNLVRVGDVNQSITGTFSSSDPKYFKEFIRE
ADNCFRMDMSNRSSKDIIDLANRLVKYVTKEFNQIECREALESMDIKTVPENMGYKENPK
PDVYSINTKRYITWKDEVEKTVIYAKNIKKKYPDKSIGILVPYNEQITQVARVLIDNNLE
FEELGPNSLNKRKMLVNISYIIDFILNCDDIEKLILALDKVFIHTDNEAGKSDFLELIKC
YTTEELIYNESNKDLIIDTNSDVYKSYIKGINAIKEILEYPITRLDLLILFIGEKLELEK
EDRAVIDYVSFYIKYLSLENTNMSLIDVYEIISNTKNRVFNYIIDVVYEMNGYEPEPGSI
TVCNYHKSKGLEWDCVFLLGLVQYNFPDNTGQKFQSDRWYLKDRYKNPIAIVKSEIDNIL
NKSVDIDYMYQSKIDVINEKIRLLYVGITRAKEMLILSCSSYKDETEIGKKNKEQKPSIY
INELEKHIQQKRSIKA
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgaataatataaactacagagaggaccaactacctataatatcttatgaaaatggtact
atggcagtaccagcagtaccaggtgcaggtaaaacatttatagttacaaacttagttgcc
aagttattatgtgaaaataaacataagggcggaaaaatacttatactaacttatatgaat
agtgcagtaagtaattttaagggaagaataaagaagatacttcaagataatgaaataaaa
gaggaaagctcatatgaagttatgacaatacatagtttggcagtaaaaataattaaagag
aaaccagaaatagtaatgttaaatgatgaatttaatatagctgatgatttacaaaaaaat
attatactaaatgaatgtataaataattttaaactaaatggcgggcaaagagcatttgta
tggtttttaaaagatcaaaaagataatgaatggaaagatagaatgttagatgcttgggaa
aatggattttatgaccttgtaggaaatgctataggtgaattaaaatataatgacatttct
ccatttgacttagaaaaaattatagatagtgattataaaggaatattaaaaataatttta
cctatatataaggattacgatagaaagttaaagcaatatggattattagattatgatgat
atattaatattagctcacaaggctttaaccttagatgaaggattaagaaataagtttcaa
tctagatataaatacatatttgaagatgaatgccaggactcaaatgaaatacaagggaaa
ataataaaattaatatctaaagaaaataataatttggtaagagttggagatgtaaatcaa
agtataacaggtacattttcatcctcagatccaaaatattttaaagagtttataagagaa
gcagataattgttttaggatggacatgtctaacaggagctctaaagatattatagattta
gcaaatagacttgtaaaatatgttacaaaagagtttaatcagatagagtgcagagaagct
ttagaatctatggatataaaaacagttcctgaaaatatgggttataaagaaaatccaaag
cctgacgtgtatagtataaatactaaaagatatattacttggaaagatgaagtagagaaa
actgtaatatatgccaagaatataaagaaaaaatatcctgataaaagtataggtatatta
gttccatataatgaacaaattacacaagttgcaagggtattaattgataataatttggag
tttgaagaattaggaccaaattcattaaataagagaaagatgttagttaatatatcatat
ataatagattttatattaaattgtgatgatatagaaaagcttatattagctttagataaa
gtttttatacatacagataatgaggcaggaaaatcagattttttagaattaataaaatgt
tatacaacagaagaacttatatataacgaaagtaataaagacttgataatagatacaaat
agtgatgtgtataagagctatataaaaggaataaatgctattaaagaaatattagaatat
cctataacaagattagatttattaattttatttattggagaaaaattagagttagaaaaa
gaagatagagcagtgattgattatgtatccttttatataaaatatttatcgttagaaaat
acaaatatgtctcttatagatgtatatgaaataatatcaaatactaaaaatagagtattt
aactatattatagatgtagtatatgaaatgaatggatatgagccagagccaggaagtata
acagtatgcaattatcataagtcaaaaggtttagaatgggattgtgtatttttattaggg
cttgtacaatataattttccagataatacaggacaaaagtttcaaagtgatagatggtat
ctaaaagatagatataaaaacccaatagccatagtaaagtcagaaatagataatatatta
aataagagcgtggatatagactatatgtatcaaagtaaaatagatgtcataaatgaaaaa
ataagattgttatacgttggaataacaagagctaaggaaatgttaatattatcatgtagt
tcgtataaagatgaaactgaaattggtaagaaaaataaggaacaaaaaccatctatatat
ataaatgaactggaaaaacatattcaacaaaaaagaagtataaaagcttaa
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