Romboutsia ilealis: CRIB_338
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Entry
CRIB_338 CDS
T09982
Name
(GenBank) ATP-dependent nuclease, subunit B
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
ril
Romboutsia ilealis
Brite
KEGG Orthology (KO) [BR:
ril00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ril03400
]
CRIB_338
Enzymes [BR:
ril01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CRIB_338
DNA repair and recombination proteins [BR:
ril03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
CRIB_338
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD-helicase
DUF6730
Motif
Other DBs
NCBI-ProteinID:
CED93095
UniProt:
A0A1V1HYS0
LinkDB
All DBs
Position
1:386885..390328
Genome browser
AA seq
1147 aa
AA seq
DB search
MSVKFILGRGGSGKSTYMLDKIKERVQDNEISPVILLVPEQYTFEMEKRMSRLFIGEQKD
KYLRSRVLSFKTMSEIVFSNVGGLTDVNINSSGKAMITYRAIESASNELEIFSKSASQPG
FVNSISEVISEMKQYNISYERLETLAQEVDNETLKLKLKDLSKIYKQFEEKLHENYIDSQ
DMLNSLAEKIDSCDYFKDSYIYIDEFTGFTPNQYRVLRTIFNKAKEVNISLTVDNPGLIT
YSKSDAFSRTKFTYAKIVKMCNEEGIKLLPSIDLNKEVLPRFENSKELQHLERYYNSYPY
KVYEEKTKNIYIKEFNNLYSEVEQVAKEIIELVRDKNIRYRDITVATRDLNKYDFLVHSI
FNEYNIPNFIDKKREAKTNPIIVLIISALEMKSRKYSYETMFRYLKSGLIGIEKDDISLL
ENYVLANGIKGKKWFEDKWEYRLYHNIVADENDYEVEVREKVNEIRDNVLRPIIKLQEKL
KGKNKVKDICRYVYEFLLDINMPETIEKLINKFKDKGELDIANQYSQVFNIVVEILDQMV
EIMGDENISLDKFVKLISLGFDEYELGLVPPSIDQVLVSSVDRMKNSNTKYLYLIGTTDG
TFPLIAKDNGLLSDNDRENLGKKGVEVDIDSKTRTFEEQFLVYKALTSASENLIITYPIA
DHEGKTLRPSVIISRLKKLFPNVDNQSYLIEEDNNSNEYTLNKITTKAPTFNELINKIKE
FDDTKEINDIWLDVYRYYITDEEYKEIAKNVITGLTYTNQVQKVEEEKINKLYDNKTLSV
SRLETYARCPFAYFMQYGLKAKERKEYSFTAPDLGTFIHNILDTFSKNMEKDRLTWRNIS
EDYIIEQVSRIVENIVSKVPGYILESSSRYRYLAYRLKKMLISAITIISEQIKQGSFEPS
DYEVDFGVYGKYPPIKIILTNGEEINLRGQIDRIDEFKNEEGKYIRIVDYKSSKRDLSLT
DIYHGLQLQLLVYLDAILESNVGLKPAGILYSSIDDPIAKFDENKDDDEIREEILKKLKM
QGLLIKDANIIKEMDKSLANGERSTSLVIPANLNKDGSLGRNTKGVSIEEFEVIRKYVKE
TIKDICEDMLDGNISIAPYKNKDKNSCEFCVYSSVCQFDSSLKDNKYKIINKKSDDEIIR
MMKGEIE
NT seq
3444 nt
NT seq
+upstream
nt +downstream
nt
atgagtgttaaattcatattgggtagaggaggaagtggaaagtctacctatatgttagat
aaaataaaagaaagagtacaagataatgaaatttctcctgtaatccttttagtaccagaa
cagtacacattcgaaatggaaaaaagaatgagtagattatttataggggagcaaaaagat
aaatatttaagatctagagtactaagttttaagactatgagtgaaatagtcttttctaac
gtgggaggattaacagatgttaatataaattctagtggtaaggctatgataacatataga
gctatagaaagtgctagtaatgagttggagatattttcaaagtcagcgtctcaacctgga
tttgtaaattcaatatctgaagttataagtgagatgaagcaatacaacataagttatgaa
agattagaaactttagctcaagaggttgataatgaaactttaaaattaaagctaaaggat
ttaagcaaaatatataaacaatttgaagaaaagttacatgaaaattatatagactctcaa
gatatgttaaattcattagcagaaaaaatagatagttgcgattattttaaagattcttat
atatacatagatgaatttactggatttacaccaaatcagtatagggtattaagaacaata
ttcaataaagctaaagaagtaaatataagcttaactgtagataatccaggtctaattaca
tatagcaaaagtgatgcattctctagaactaaatttacatatgcaaagatagttaaaatg
tgtaatgaagaaggaataaaactattaccttctattgatttaaataaagaagttttgcct
agatttgaaaatagtaaagaattacagcatttagagagatattataattcttatccatat
aaagtatatgaagaaaaaactaaaaacatatatataaaagaattcaacaacttatattct
gaagtagaacaagtagcaaaggaaataatagagttagtaagagataaaaatataagatat
agagatataactgttgcaactagagatttaaataaatacgatttcttagttcactctata
tttaatgaatataatataccgaactttatagataaaaaaagggaagctaaaacaaatcct
ataatagtgcttattatatctgcacttgaaatgaaaagcagaaaatatagttatgagact
atgtttagatatttaaaaagtggacttataggaattgagaaagatgatataagcttactt
gaaaattatgtactagctaatggaattaagggtaaaaaatggtttgaagataaatgggaa
tataggctataccataatatagtagctgatgaaaatgactatgaagtagaagtaagagaa
aaagttaatgaaataagagataacgtattaagacctataattaaattacaagaaaaatta
aaaggtaaaaataaagtaaaagatatttgtagatatgtatatgaatttttacttgatata
aatatgccagaaactatagaaaaacttataaataaatttaaagataaaggtgaattagat
atagctaatcaatattctcaagtatttaatatagtggtagaaatacttgatcaaatggta
gaaataatgggagatgaaaatatatctttagataaatttgtaaagcttataagtttaggt
tttgatgaatatgaattaggattagtacctccaagtatagaccaagtccttgtaagtagt
gtagatagaatgaaaaattcaaatacaaaatacctttatctaataggaacaacggatgga
acatttccactaatagctaaagataatggactattaagtgataatgatagagaaaattta
ggtaagaaaggtgtagaggtagatatagacagtaaaactagaacttttgaagaacaattt
ttagtttataaagcactaacatctgcgagtgaaaatttaataataacttatcctatagct
gaccatgaaggtaaaactttaagaccttctgttataatatctagattaaagaagttattc
cctaatgtagataatcaaagttatttaatagaagaagataataattcgaacgaatatact
ttaaataagataacaactaaagcaccaacttttaatgaacttataaataaaataaaagaa
tttgatgatacaaaagaaataaatgatatttggctagatgtatatagatattatataact
gatgaagagtataaagaaatagctaagaacgtaataactggattaacatatacaaatcag
gtacaaaaagtagaagaagaaaagataaataaattatatgataataaaactcttagtgta
tcaaggctagaaacttatgcaagatgtccatttgcttattttatgcaatatggattaaaa
gcaaaagaacgaaaagaatactcatttacagctcctgacttaggtacattcatacataat
atattagacacattctctaagaatatggaaaaggatagattaacttggagaaacataagt
gaagactatataatagaacaagtttcaagaatagttgagaatatagtgtctaaggttcca
ggatatattcttgagagttcatcaagatatagatacttagcatatagattaaagaaaatg
cttatatctgcaataactataataagtgaacaaataaaacaaggatcatttgaaccaagc
gattacgaggtagattttggagtatatggaaaatatcctcctataaaaataatattaact
aatggagaagaaataaatctaagggggcaaattgacagaatagatgaatttaaaaatgaa
gaaggaaaatatataagaatagttgactataaatctagcaaaagagacttaagtttaact
gatatataccacggattacaacttcaattattagtatacctagatgcaatattagaaagt
aatgtaggtttaaaaccggcaggaatattatactcatcaatagacgacccgatagctaaa
tttgatgaaaataaagatgatgatgaaataagagaagaaattcttaaaaaattaaagatg
caagggttacttataaaagacgctaacataataaaggaaatggataagtccttagcaaat
ggggagagaagtacatctttagttataccagcaaatttaaataaagatggaagtttaggt
agaaatacaaaaggtgtaagtattgaagagtttgaagtaataagaaagtatgtaaaagaa
actataaaagatatatgtgaagatatgcttgatggaaacataagtatagctccttacaaa
aataaagataaaaattcatgtgagttttgtgtgtactcgtcagtatgccagtttgatagt
agcttaaaggataataaatataaaataatcaataaaaaaagcgatgatgaaataataaga
atgatgaagggagagattgaataa
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