Romboutsia ilealis: CRIB_347
Help
Entry
CRIB_347 CDS
T09982
Name
(GenBank) Nuclease SbcCD subunit C
KO
K03546
DNA repair protein SbcC/Rad50
Organism
ril
Romboutsia ilealis
Brite
KEGG Orthology (KO) [BR:
ril00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ril03400
]
CRIB_347
DNA repair and recombination proteins [BR:
ril03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CRIB_347
Archaeal homologous recombinant proteins
CRIB_347
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcC_Walker_B
AAA_29
AAA_23
SMC_N
ABC_tran
AAA_27
MPH2
Motif
Other DBs
NCBI-ProteinID:
CED93104
UniProt:
A0A1V1I120
LinkDB
All DBs
Position
1:400635..404159
Genome browser
AA seq
1174 aa
AA seq
DB search
MKPIKLEFSGLNSYIEKTTIDFEILMNHGIFGIFGDTGSGKSTILDAISLALYGEIPRNT
QDYININCDKAIISYEFEIKNKYKKKRYRVSRTIVRSEMGTKTFKAKLSELKNNNIEEVL
SEDVDNVNKKIINIIGLTFNDFTKAILLPQGRFNEFIKSTDSSKRDTLERVFDLGKYGEI
LNYKIIKREEIKFKLKQDLETELRKYEGVTHEAYVNELREIESLKYYLKRKNMEFEIAQK
KYKESEEIYENQNNLNKYEVIKKELELKSNDINIKRKQLENFTSAQQINPYINIVQSLKK
KINENADKMNSLDKKLDILNQELVISKQKYEKSYKIKSENIPELSTEKIKIQRARELEKE
IDIVDKELRQLKEVRDELNYKKHDLEKIKLEAESNKDIITNSLKELEGKIDKLKISAKLK
RQIFKAYNYEKEYEIILEDRNSKADKYKFIINKLDEYNLSLKYLQKDKYAIGDKLKDITI
HYDSLLKKCPGKMNDVFIKNDNLMELKLKLNLEKEKEIKIDNLQTNLNKTIEQKHKFDRE
VNTLNDKLEQLEKEINYVEADISKLKYLNLAEELKIDLKENMPCPVCGSRNHEYITTIDN
NKIAFNQKKLEQLYQEKNYIKNKLEDTKSKYIEQVCLEQINLKEIKKIKSTREEIKSNDI
FKKIDEENRKVEVLKNSIQAWQKDKEDTEEKLMKLKDTKNSIEKDEIKITQNIIFYKQYA
NEIKSELDNLDEDLKNVKDNYIGLKSILKVSDLCSKIQEIKNNERILEELSEEYIKIKDN
KANIENIIQKHNNSLYEINVELVKTVESHAEKKKSRDEKYKEVISITRGEDTLVLISNID
EEINRITYQEEKNKKILEEQKIEYERISSLKSNLEGVLYIEKEEYETQQNQLNQLLKDNK
FESIYEVKRSVLDLDYIRTIQDEIMHYDDEMNTAQLKCKELKEKLCGRRIDKENFKSLKN
NINIINEELIKIKEKISKKNNILVNLEKSLDIVDEINKDLDKINKDIKLLEELQDVVKDK
QFVEYMSISRLMDICENASNRLAFITNGRYNLEFDKKLNFIVRDNFNNRAIRTIDTLSGG
ELFLTSLALAIGFSSQIQLKGNSILEVLFLDEGFGTLDDKTLKQTIKSLEEIYSKNLSIG
IISHIKDLKEYIPAKLIVTSPTEKEGSKIKLEYN
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgaaacctattaaattagagtttagcggactgaatagttatatagaaaaaactactata
gattttgaaatactaatgaatcatggaatatttgggatatttggagatacaggaagcgga
aaatctacaatacttgatgcaataagtcttgctttatatggagaaatacctagaaatact
caagactacataaatattaactgtgataaggctataatatcatacgaatttgaaataaaa
aataagtataagaaaaaaagatatagagtaagtagaactatagtaagaagtgaaatgggt
acaaaaacatttaaagctaaattatcagaattaaaaaataataatatagaagaggtactt
tcggaagatgttgataatgtaaataaaaaaattattaatataattggattgacatttaat
gattttaccaaggcaatactcttgccacaaggaagatttaatgaatttataaaatctaca
gacagtagtaaaagagacacattagaaagagtatttgatttaggaaaatatggtgagatt
ttaaattataaaattataaaaagagaagagataaaatttaagctaaaacaggatttagag
acagaattaaggaaatatgaaggtgtaactcatgaggcatatgtaaatgaactaagagaa
atagagtcgttaaagtattatctaaaaagaaagaatatggaatttgagatagcacaaaaa
aaatataaagaaagtgaagaaatatacgaaaatcaaaataatttaaataaatatgaagtt
ataaagaaagaattagagctaaaatctaatgatataaatataaaaagaaaacagttagaa
aactttactagtgcacaacaaataaatccatatataaatatagttcaaagtttaaagaag
aagatcaatgaaaatgctgataaaatgaatagtttagataaaaaactagatatattaaat
caagagttagttataagtaaacagaaatatgaaaaatcatacaagataaaaagtgagaat
ataccagaattaagtacagaaaaaataaagatacaaagagctagagaattagaaaaagaa
atagatatagtagataaggaattaagacagttaaaagaagttagagatgaattaaattat
aaaaaacatgatctagaaaaaataaaactagaagcggaatctaataaagatataattaca
aattctttaaaagaattagaaggaaaaattgataaattaaaaattagtgcaaaattaaag
agacaaatatttaaagcttataattatgaaaaagaatatgagattatacttgaagatcga
aatagtaaagctgataagtataaatttattatcaataaattagatgaatataatttaagt
ttaaaatatcttcagaaagataaatatgccataggagataagttaaaagatataactata
cattatgatagtttattaaaaaagtgcccagggaagatgaatgatgtatttataaaaaat
gataatttaatggaattaaaattaaagttaaacttagaaaaagaaaaagaaataaaaata
gataatcttcaaactaatttaaacaaaacaatagagcaaaaacataaatttgaccgagag
gtaaatactctaaacgataaattagagcaattagaaaaagagataaattatgtagaagct
gatataagtaagcttaaatacttgaatttagcagaagaattaaagatagatttaaaagaa
aatatgccttgtccagtatgtggatcaagaaatcatgaatatataactactatagataat
aataaaatagcttttaatcaaaaaaagttagaacaattatatcaagaaaagaactatata
aaaaataagctagaagatacaaaatctaaatacatagaacaagtatgtctggagcagatt
aatttaaaagaaattaaaaaaataaagtcaactagagaagagataaaatcaaatgatata
tttaaaaaaatagacgaggaaaatcgtaaagtagaggttctaaaaaatagcatacaagca
tggcaaaaagataaggaagatacagaagaaaaattaatgaagttaaaagatacaaaaaat
agtatagaaaaagatgaaattaagataactcaaaatataatcttttataaacaatatgca
aatgaaattaaatctgaattagataacttagatgaagatttaaaaaatgtaaaagataat
tatataggattaaaatctatattaaaagtttcagacttatgctctaagattcaagaaata
aaaaataatgaaagaatattagaagaattaagtgaagaatatataaaaattaaagataac
aaagcaaatatagaaaatattatacaaaagcacaataatagtctatacgaaataaatgta
gaattagtaaagactgttgaatcacacgctgaaaagaaaaaatcaagagatgaaaaatat
aaagaagttatatctataacaagaggagaagatacgttagtattaatttctaatatagat
gaagaaataaatagaataacctatcaagaagagaaaaataaaaaaatattagaagaacaa
aaaatagaatatgaaagaatctcatcattaaaatctaatttagaaggggtattatatata
gaaaaagaagaatatgaaacgcaacagaatcagttaaatcaattattaaaagataataaa
tttgaaagtatatatgaagtaaaaagatcggtattagatttagattatataagaacaatt
caagatgagataatgcattatgatgatgaaatgaatacggctcaattaaagtgtaaagaa
ttaaaggaaaaattatgtggaagaaggatagataaagaaaactttaaaagtttaaaaaat
aatataaatataataaatgaagaactaataaagattaaagaaaaaatatctaaaaaaaat
aatatactagttaatttggaaaaatctctagatatagttgatgaaataaataaagactta
gataaaataaataaagatataaaacttttagaagaattacaagatgttgtaaaagataag
caatttgttgaatatatgtccattagtaggctaatggatatttgtgaaaatgcatcaaat
agattagcatttataacaaatggtagatacaatttagaatttgataagaaattaaatttt
atagtacgagataattttaataatagagctataagaacaattgacacattgtctggtgga
gaactatttttaacttcactagctttagcgatagggttttcatcgcaaatacagctaaaa
ggaaattcaatattagaggtcttatttttagatgaaggatttggaacattagatgataaa
acattaaaacaaacgataaagtcattagaagaaatatatagtaagaatttaagtattgga
ataataagtcatattaaagatctaaaagaatacattccagctaaattaattgtaacatct
cctacagagaaagaagggtctaaaattaaattagaatataattaa
DBGET
integrated database retrieval system