Romboutsia ilealis: CRIB_923
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Entry
CRIB_923 CDS
T09982
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
ril
Romboutsia ilealis
Brite
KEGG Orthology (KO) [BR:
ril00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ril03016
]
CRIB_923
Enzymes [BR:
ril01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
CRIB_923
Transfer RNA biogenesis [BR:
ril03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CRIB_923
Prokaryotic type
CRIB_923
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Whirly
Motif
Other DBs
NCBI-ProteinID:
CED93674
UniProt:
A0A1V1I2L8
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All DBs
Position
1:985342..986079
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AA seq
245 aa
AA seq
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MRNIKITIKYDGSRYKGFQRLKDNDMTIQGKIEDVLSKMANENIEIIGSGRTDMGVHAYG
QVANFKTTSNLSVDKMKTYLYEYLPEDIVITNIEEVDERFHSRYNAKSKVYLYKIYNNKF
HDPFLRKYTTHIHKKLDIELMKEASKYFIGEHDFTSFASSKSKKKSNVRIIHSINITEND
GLVEIYFEGNGFLYNMVRIMTGALIDVGHKKIAPEDIKIMLEEKDRTKAADTASAKGLYL
YKVSY
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgagaaacataaagataactataaaatatgatggctcaaggtataaagggtttcaaagg
ctaaaagacaatgatatgacaatacaaggtaagatagaggatgtcttaagcaaaatggct
aatgaaaacatagaaataattggatctggaagaacagatatgggggttcatgcatatgga
caagttgctaattttaaaacaacttctaatttatctgtagacaaaatgaaaacatattta
tatgagtatttaccagaagatatagtaataactaacatagaagaagtagatgaaagattc
catagtaggtataatgcaaaatcaaaagtatacttatataaaatatacaataataaattc
catgatccatttttaagaaagtatactactcatatacataagaaattagacatagaatta
atgaaagaggcaagtaaatattttataggcgaacatgattttactagttttgcatcatct
aaatctaagaaaaaatcaaatgtaagaattatacattctataaatataacagaaaatgat
ggtttagtagaaatatactttgaaggtaatggatttttatataatatggtaagaataatg
acaggtgctttaatagatgtaggacataaaaaaatagcacctgaagatattaaaataatg
cttgaagaaaaagataggactaaagctgcagatactgcttcggctaaaggattatattta
tataaagtaagttattaa
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