Roseburia intestinalis M50/1: ROI_00300
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Entry
ROI_00300 CDS
T02598
Name
(GenBank) Site-specific recombinases, DNA invertase Pin homologs
KO
K06400
site-specific DNA recombinase
Organism
rim
Roseburia intestinalis M50/1
Brite
KEGG Orthology (KO) [BR:
rim00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99978 Cell growth
ROI_00300
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GFIT
Motif
Pfam:
Resolvase
Recombinase
Zn_ribbon_recom
DUF4368
Zn_ribbon_GRF_2
Motif
Other DBs
NCBI-ProteinID:
CBL07393
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Position
15838..17529
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AA seq
563 aa
AA seq
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MSKQISKIYHAAIYVRLSKEDGDVSTSAKAESNSISNQKDFIRNFLADKKDIRIVKEYVD
DGYSGSNFDRPSFQTMMEDIKRGVIDCVVVKDLSRFGREYIDSGRYIERLFPALGVRFIA
INDNYDSVTGKSQGDEIIIPFKNLINDAYCRDISIKIRSHLDVKRKNGEYIGAFVPYGYE
KSDDDKHKLVIDIYAAGIVKEIFRLKLHGMSQDAIATQLNNEGVLAPMEYKQSTGSGYQT
GFLQNEKSVWSSVTVRRILENEIYIGNLVQGKRTTPNHKVKQEVVKPESDWIRIEKNHEP
IISDRDYEIVQRLLGMDTRISPDSDVVYNLSGIAVCADCGSPMTRKITTAGDKKYAYYIC
SNHKLTKQCSQHSISVSLLEDTVLEMLKLHIKNVMNLEEILDYIGTIPFQQLDVKSLEAR
KQKKLEEVEKCKRLKTSLYEDMKDGILTKEEYLELHEAYLKKAKEGEEIIRQIERDIALI
LEEKDDKHLWMNYFTEYKDIKELTRDVVVKLISEVRVSENKEVEIVFDFDDCYKQLLESV
EKLGYQVDKEPGGQLNISRREAV
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaacaaatctcaaaaatctatcatgcagccatctacgttagattatctaaggag
gatggcgatgtttctaccagcgcaaaagctgagagtaatagtatttcaaatcaaaaggat
ttcatccgaaatttccttgcagacaaaaaggacattagaatagttaaagaatatgtggat
gatggttattccggctctaattttgaccgtccgtcttttcagacgatgatggaagatatt
aagcgaggagtaattgattgtgtggtggtaaaggatctttcacgttttggacgcgagtat
attgattcaggtcgatacatcgaaagattatttccggctcttggtgtaaggtttattgca
atcaatgataactatgacagtgtgactggaaagtcacagggggatgagattattattccg
tttaaaaacctgatcaatgatgcatattgcagggatatcagtataaagatacgaagccat
ttggatgtaaagagaaaaaatggtgagtatatcggtgcatttgttccctatgggtatgaa
aaatcggatgatgataaacataagctggttattgatatttatgcagccggtattgtgaag
gaaatttttcggctaaagcttcacggaatgagtcaggatgcaatagcaacacagttgaat
aatgagggtgtgcttgcacctatggaatataagcagagcacagggagcggttatcagacc
ggatttttacagaatgaaaaatcggtatggagttcagtcacggtccgtaggattcttgaa
aatgagatttacattggaaatcttgttcagggcaaaagaacgacaccaaatcataaagtg
aagcaggaggttgttaagccggaatctgactggataagaatcgaaaaaaatcatgagccg
attattagtgacagggactatgagattgttcaaagactgttaggaatggatacgagaatc
tctccggattccgatgtggtctataatctttcaggtattgcagtatgtgcagactgcggt
tcaccaatgacaagaaaaattacaacagcaggtgataagaaatacgcttactatatctgc
tctaatcataaattgacaaagcagtgttcacagcactcaatatcagtatcgttattagag
gatacggtgcttgaaatgttaaagcttcatatcaaaaacgtaatgaatctggaagaaata
cttgattatattggaacaattcctttccagcagcttgatgtaaaaagtcttgaagcaaga
aaacagaaaaaacttgaggaagttgagaagtgtaaaagactgaaaacttcactgtatgaa
gatatgaaggacggaattcttactaaagaagaatatcttgaacttcatgaggcatatctg
aaaaaagcaaaagagggagaagaaataattcgccagattgagagagacattgctttaatt
cttgaggagaaggatgataagcatctctggatgaattattttaccgaatacaaggatatt
aaggaactgaccagggacgtggttgtaaaactgatttctgaagtaagagtttcagagaat
aaagaggttgagatcgtatttgattttgatgattgttataagcagttattagaatcggtc
gaaaaactgggctatcaagtagataaagaaccgggtggacaattaaatatcagcagaagg
gaggctgtgtaa
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