Roseburia intestinalis M50/1: ROI_00320
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Entry
ROI_00320 CDS
T02598
Name
(GenBank) Site-specific recombinases, DNA invertase Pin homologs
KO
K06400
site-specific DNA recombinase
Organism
rim
Roseburia intestinalis M50/1
Brite
KEGG Orthology (KO) [BR:
rim00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99978 Cell growth
ROI_00320
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Gene cluster
GFIT
Motif
Pfam:
Recombinase
Resolvase
Zn_ribbon_recom
DUF7365
Cep57_CLD_2
FlxA
Motif
Other DBs
NCBI-ProteinID:
CBL07395
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Position
19206..20756
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AA seq
516 aa
AA seq
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MSKITAMYIRLSMEDEDVSLNRKEESNSISSQRELLKAYIENHSELKDTKVQEYCDDGFT
GTKFERPGYMKLMEDIRAEKISCIVVKDLSRLGRDYIEVGSLLEQILPLYQVRVIAVNDN
YDSDNYDGSTGGMNIAFKNLIYMLYSRDLSNKICSAKHTRILNGENISGQLRYGYVKDPN
DKHKIIVDPEAAEVVKLIFELTAQGKRKTEVANYLNAHGIDTPSAYKKRKGSKNFFHAVE
VKSLWSTSSIHDILNDEVYLGKLIWNKTKKRVGSNNTSTYVPKDEWIVIENCHEPIITQK
LFDTAHANSKKYIRPKRGKRNYNPFYYCGVCGRALVPSKRVKGDILLCSSSRIEENSPCK
SNRVEIAKVEDTIMKIVNMYATAYLDEKGIKKAGKSKEVSPEEKIATLEKKVKSLSSKKM
MLYSDYKDDKLTREEYVKRSKAMVEQIDELHQEIEQLKTEIPPEDNSSSKFETQLESIIN
MESFDREKIQKVIKKVIINGEDNIEIVWNTDDPFFK
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgagtaagataactgctatgtatattcgcctttctatggaagatgaagatgtatcatta
aatcggaaagaggagagtaacagtatatccagccagcgggaattgttaaaagcatatatt
gaaaatcattcggagcttaaggatacgaaggtacaggaatactgtgatgatggatttacc
ggaacaaaatttgaaagaccaggctatatgaagcttatggaggatatccgggctgaaaaa
atatcatgcattgttgtaaaggatttatccagactcggaagggattatattgaagttgga
agtcttttggagcagatacttccactttatcaggtgcgggttattgcagttaatgacaat
tatgacagcgataactatgatggttccaccggtggtatgaatattgcgtttaagaattta
atctatatgctttatagcagggacttgtccaataaaatatgttctgcaaagcacacaagg
atactgaatggggagaacattagtggtcagttaaggtatggatatgtcaaagatccaaat
gataagcataagattattgtagatccggaagcagcagaagtggttaagctgatatttgaa
ctgaccgcacagggcaaaagaaaaacggaagtggcaaattacttaaatgctcacggtatt
gatacaccatccgcatataagaagagaaaaggaagcaaaaactttttccatgcagttgaa
gtgaaaagcttgtggagtacttcttctatccacgatatattaaacgatgaagtttatctt
ggaaaactgatatggaataaaacaaagaagagggtaggcagcaataacacttcaacctat
gtgcctaaagacgaatggattgtgatagagaattgtcatgaacctattattactcagaaa
ttatttgatacggcacatgctaattcaaaaaaatatattcgtccaaagcgtggtaagaga
aactataatccgttttattattgtggggtatgtggcagagccttggtacccagcaaaagg
gtaaaaggtgacattcttctttgttcctcgtccagaattgaggaaaattctccatgcaaa
agcaacagggtggaaattgccaaggttgaagatacaatcatgaaaattgtaaatatgtat
gcaacagcttatctggatgagaaaggaataaagaaagctggtaaatcgaaagaagtatct
ccggaagaaaagattgcaacacttgaaaagaaggtgaagagcctcagcagtaaaaagatg
atgttgtattctgattataaggatgacaagctcacaagagaagagtatgtcaagcgttca
aaggcgatggtggagcagattgatgaattgcatcaggaaatcgaacagcttaaaacagaa
ataccaccagaagataattcttctagtaagtttgagacacagttagaaagtatcatcaat
atggaatcttttgacagagagaaaatccagaaggtaatcaaaaaagtgattatcaatgga
gaggacaatatagagattgtatggaatacagatgatccatttttcaagtaa
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