Roseburia intestinalis M50/1: ROI_00960
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Entry
ROI_00960 CDS
T02598
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
rim
Roseburia intestinalis M50/1
Brite
KEGG Orthology (KO) [BR:
rim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rim03400
]
ROI_00960
DNA repair and recombination proteins [BR:
rim03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
ROI_00960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
AAA_16
Lon_C
nSTAND3
NTPase_1
AAA_24
AAA
RecA
Rad51
AAA_14
ATPase_2
SLFN-g3_helicase
AAA_22
IstB_IS21
ABC_tran
CbiA
NPHP3_N
Elong_Iki1
DUF7125
DEAD
MeaB
NACHT
KdpD
KTI12
MCM
divDNAB
AAA_5
zf-RING_10
DAP3
GvpD_P-loop
DZR
DUF815
AAA_30
AAA_19
TK
AAA_33
DUF7129
PAXNEB
Motif
Other DBs
NCBI-ProteinID:
CBL07450
LinkDB
All DBs
Position
88836..90221
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AA seq
461 aa
AA seq
DB search
MPKGKTTVFFCQECGYESSKWMGQCPACKEWNTFVEEMIDKKSAAKGGRVAAKAAEAKNV
PLSQIEMTQDKRMSTDMKELDRVLGGGIVQGSLVLVGGDPGIGKSTLLLQVCRNLSEKGV
RVLYISGEESLQQIKIRAERIGTFGDSLTLLCETNLDTIKTVIDREKPQIVIIDSIQTMY
NEEVSSAPGSVSQVRESTGVFMQIAKGMGISIFIVGHVTKEGVVAGPRVLEHMVDTVLYF
EGDRHAAYRILRGVKNRFGSTNEIGVFEMRQNGLMEVENPSEYMLSGKPEGASGSVVACS
MEGTRPILVEVQALVCHSNFGIPRRTAAGTDFNRVNLLMAVLEKRLGLKLGDCDAYVNIA
GGVKMNEPAIDLGIVLAIISSYRENPINEKTICFGEVGLSGEVRAVSMAEQRVTEAKKLG
FDECILPQVSLDSMKDSGSVPKGIRLTGVRSVKDAMDAILK
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgccgaagggaaaaacaacagtatttttttgtcaggaatgtggttacgaatcatcaaag
tggatgggacagtgtcctgcatgtaaggaatggaatacatttgttgaggagatgatcgat
aaaaaaagtgcagcaaaaggcggcagggtagcggcaaaagcggcagaggcgaagaacgtt
ccgctctcacagatcgagatgacacaggacaaacgcatgtcgacggatatgaaagagctt
gaccgtgtacttggcggcggaatcgtacagggatctttagtgttagtgggcggtgatccg
ggaatcggtaaatcaacactgcttttgcaggtatgccggaatttatcggagaaaggtgtg
cgcgtattatatatatccggagaggaatccctgcagcagatcaaaataagggcagaacgt
atcggaacctttggcgattcgctgacacttttatgtgaaacgaacttagacacgataaaa
acggtgattgatcgggaaaaaccgcagatcgtgatcatagattccatacagaccatgtat
aacgaagaagtttcctctgcaccgggcagcgtatcacaggtgcgggaatccacaggggta
tttatgcagattgcaaaggggatgggaatttccatctttattgtcggtcatgtgacgaaa
gagggcgtggttgcgggtccgagagttttagaacacatggtggatacggtactctatttt
gagggggacaggcatgcggcataccgtatactgcgcggtgtcaaaaacaggttcggctca
acgaatgagattggcgtgtttgagatgagacagaacggactgatggaagtggaaaatcct
tcggaatacatgctgagcgggaaaccggaaggtgcatccggttcggttgttgcgtgttct
atggaaggaaccagaccgattctggtggaagtacaggcgttagtctgccacagtaatttt
ggaattccgcggagaacggctgcaggcaccgattttaacagggtaaatcttctgatggca
gtacttgaaaaaaggctgggattaaaacttggagactgtgacgcttatgtgaatatcgcg
ggcggcgtaaaaatgaatgagccagcgatcgatcttggcattgtgcttgccattatatcc
agttaccgtgaaaacccgatcaatgagaagacgatctgtttcggagaagtgggcttaagc
ggagaagtgcgtgccgtcagtatggcagagcagcgcgtgacagaagcaaaaaaacttgga
tttgatgaatgcattctgccccaggtcagcctggattccatgaaggacagtggatctgtg
ccaaagggaatccgcctgactggtgtgaggtcagtgaaagatgcgatggatgcgatattg
aaataa
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