Roseburia intestinalis M50/1: ROI_01390
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Entry
ROI_01390 CDS
T02598
Name
(GenBank) penicillin-binding protein, 1A family
KO
K18770
penicillin-binding protein 4 [EC:
2.4.99.28
3.4.16.4
]
Organism
rim
Roseburia intestinalis M50/1
Pathway
rim00550
Peptidoglycan biosynthesis
rim01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rim00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
ROI_01390
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
rim01003
]
ROI_01390
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rim01011
]
ROI_01390
Enzymes [BR:
rim01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
ROI_01390
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
ROI_01390
Glycosyltransferases [BR:
rim01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
ROI_01390
Peptidoglycan biosynthesis and degradation proteins [BR:
rim01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
ROI_01390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
PAT1
Motif
Other DBs
NCBI-ProteinID:
CBL07484
LinkDB
All DBs
Position
135367..137757
Genome browser
AA seq
796 aa
AA seq
DB search
MAARKKKKKKYRMFWFFAKMQLVLLLAVIAGACWYYFGGYAEEVKDLKTQAIELVRHSSK
ETFKANQTSIVYASDESVISTLKGGKDSYYLSITDMPSNVECAIVSIEDKKFFRHNGIDY
RALLRAVKAMIENGEATQGGSTITMQLARNIFLSQEKTWQRKVEEMYIARELEKKYTKDE
ILEFYLNNIYFGNGYYGIQSASRGYFNRDVQDLDLSEQAFLCAIPNNPTLYDPLTNITNT
YKRRNRILKNMLDDGKISKTAYENALGEVMALDRPEALAKNDYVETYTYYCAARALMETE
DFQFKYQFSSEDEKNKYDEAYETLYSECQKKLYTAGYRIYTSFDLNLQQELQDTVNEALA
GYTEVNDEGVYALQSAAVCIDNDNGYVRAIVGGRSQDFSGYTLNRAFQSYRQPGSAIKPL
IVYTPSFERNYTPDSVVTDEPIEDGPRNANGSYSGQITVRTAVEKSVNTIAWKLYEELTP
EVGLSYLEKMNFAKLDANDYRPATALGGFTNGVSALEMASGYAAIENDGNYRAPTCIVKI
LDADGNEIYAPAQTEEAVYKQNAARMMTDVLKGVITSGTAHGLGLGSMPAAGKTGTSNDQ
KDGWFVGYTRYYTTSIWVGYDMPKKMDKLMGSTYPGTIWQKFMLKAHEGRSPMEFLPYAQ
VSDEVHVFHPEETEENPDGNVEENAGQQDQNQQPQDQQQPQNQQQQDQQQPQNQQQQDQQ
QPQEQQQQQQEQRQQQQEQQQQQDQQQDQQQQQQDQQQDQQQQQQDQQQEQQQQQQQDQQ
QQQDQQQDQQQQDQQQ
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaagaaaaaagaaaaaaaagaaataccgtatgttctggtttttcgcaaagatg
cagctggtgctgctgcttgcagtcattgcaggggcatgctggtattattttggcggttac
gcggaagaagtaaaagacttaaagacgcaggcaatagagctggtgcgccattccagcaag
gaaacatttaaggcaaatcagaccagtatcgtctatgcttcggatgaaagtgtaatctcc
acattaaaaggcggaaaagattcttattatctttcgattacagatatgccgagtaatgta
gagtgtgctatcgtcagtatagaggataaaaagtttttccggcataacggaattgactac
cgggcgcttttgcgtgcggtaaaggcaatgattgaaaatggagaggcaacacagggcggc
agtacgatcacaatgcagcttgcgcgaaatatttttttgagccaggaaaagacatggcag
agaaaggttgaggaaatgtatatcgcgcgggaactcgaaaagaagtacaccaaagatgag
attcttgaattctatcttaataatatttattttggaaacggatactatgggatccagtcg
gcaagccgtgggtattttaaccgggatgtgcaggatcttgatctgtcggagcaggcattt
ttgtgtgcgataccaaataatccgacgctctatgatccacttacgaatatcacgaacaca
tacaagagaagaaaccgtattttgaaaaatatgctcgatgatgggaaaatttccaaaaca
gcatacgaaaatgcactgggtgaggtgatggcgttagaccggccggaagcactggcaaaa
aatgattatgtggagacctatacctattattgtgcagccagggcattgatggaaacggag
gatttccagtttaaatatcagttttcctcggaagatgaaaaaaacaaatatgacgaagct
tatgagacgctgtacagtgagtgtcagaaaaagctgtatactgcgggttaccggatctat
acgtcatttgacctgaacttacagcaggaactgcaggatacggtaaacgaggcactcgcc
ggttacacggaggtcaatgatgagggcgtgtatgccttgcagtcggcagcagtctgtatt
gacaatgacaatggctatgtcagggcgatcgtgggtggaagaagccaggatttctccggt
tatacgttaaaccgtgcatttcagagttaccgtcagccgggcagtgccattaagccgctg
atcgtatatacaccgtcttttgagcgcaattatacgccggactctgtggtgacagacgag
ccgatcgaggatggaccaaggaatgcaaatggttcctattctggtcagatcacagtccgg
acggctgtggagaagtctgtcaatacgatcgcatggaaattatatgaggagctgactccg
gaagtcggtctttcttatcttgaaaaaatgaattttgcaaaactggatgccaatgactac
agaccggcaacggcacttggaggttttacaaacggtgtgtctgcgcttgagatggcgtcc
gggtatgcagcgatcgaaaacgatggaaattaccgggcaccgacctgtattgttaagata
ttagatgcggatggcaatgaaatctatgcacctgcacagacggaagaggctgtgtataag
cagaatgcggcgcgtatgatgacagatgttttaaaaggtgttatcacgagcggaacagca
cacggacttggtcttggcagtatgcctgcagccggaaagacaggtacatccaacgaccag
aaggacggatggtttgtgggatatacgagatattacacgacgagtatctgggttggttat
gatatgccgaaaaaaatggataaactgatgggatctacctatccgggcacgatctggcag
aagtttatgttaaaggcacatgaaggacgttctccgatggaatttttaccgtatgcgcag
gtatcggatgaggttcatgtattccatccggaagagacggaggaaaatccggatgggaat
gtggaggaaaatgccgggcagcaggatcagaatcagcagccacaggatcagcagcaacca
cagaaccagcagcaacaggatcagcagcaaccacagaaccagcagcaacaggatcagcag
caaccacaggaacagcagcaacagcagcaggagcaacggcaacaacagcaggaacaacaa
cagcaacaagatcagcagcaggaccaacagcaacagcaacaagatcagcagcaggaccaa
cagcaacagcaacaagatcagcagcaggagcagcaacagcaacaacagcaggaccaacaa
cagcaacaagatcagcagcaggaccaacagcaacaagaccaacagcagtga
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