Roseburia intestinalis M50/1: ROI_04680
Help
Entry
ROI_04680 CDS
T02598
Name
(GenBank) N-acetylmuramoyl-L-alanine amidase
Organism
rim
Roseburia intestinalis M50/1
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Amidase_3
fn3
DUF4992
GH85_C
Ig_J_second
Motif
Other DBs
NCBI-ProteinID:
CBL07763
LinkDB
All DBs
Position
460286..464659
Genome browser
AA seq
1457 aa
AA seq
DB search
MKKRILAVIMAVCVSMTALPADVRAAEDSAVQTESTQKTSPSEKSAQTENTGNAAEELTG
TEMAETEEAAETEETAETEETTETVTIETETIETEEPAETETSETEKPAETETIETETTE
TGEPTETETGTTETEEPTETGTTETEEPTETETAETETVQAAELNYMMVESPYVETPGTQ
NVVLSLGTGDEQLSDIVLNYKNLTTGKIYQVKAAGTEEDMIRFTMDFSENGQAGEYQITS
VQFTQEKTKQEILLSDLGMDVRFGVNEQAETNPDQVLYDEDAYADVDADVVTMSADGEVI
SENTVENVLEQGISEAVASVADNLKGANSNVKVVLDPGHDGTHAGASGFGVQEADLTLKI
ATYCKEELSTYNGITVYMTRESASCPAGGGDYIACLDARANLAKNVGANVLVSFHLNTAN
GTARGVEVYYPNSNYNAQVGSNGQALAKKICDKLAALGLNYRGTLIRNASYDKYPDGSAA
DYYGLIRRCKNNGIPGLIIEHAFLDNANDYYTYLSSDEKLKALGVADATAIAEYFGLTKG
AKTVTLNYTQSRADGSLRLKWTGLDNVDYYEIYRNTVNDTNYPKIDEVSDATSYIDDTVK
AGTKYYYLVRPVFNDGTAGEYSKPISGVALGKTNLTKIKAKSGKKITLTWKKVSKAEGYL
IYRQDSSDSKFYQIGTVKSGSTLTYTDTVKSNNKTYTYKVQAYNTNNGRQGVGAYSSTKS
AKTLAKAKITGITSSDEEVLKISWNKVSGAKGYIISRSTKKDSGYSEIDTVSGEKTTSYT
DDTVKAGKTYYYKVEAYNVNSGTKGYGGASDAVAGKTAKRTKITSIVSTNEKTLTIKWNK
ITGAYGYRIKRSTDEDGTYKVVKTIKSGNTTSYKDTSVKAGKTYYYTVETMVKTGDNICY
SGDSASMEGRTAKKAKIKYAVSNGSNQIEVNWGAVSGAYGYRIKRSTSKNGTYKVVATLK
GKNNTTYQDKKLKTAKTYYYKIETINKVNGKKGYSGNSAAVSAKTLKTTSITAVKATGST
SVRLEWKAVDGASGYQIYRSTSKDSGYKKVGQVKGKNTKKYEDKTLEAGKTYYYQVRAYK
SNSAKNGVASFSKAQKAWTIKQVVFSQITSNSKNQVTLGWKKVSKAQGYDIYRSDESNSG
FEKIASISSGSTLTYTDKGVKSGNTYYYKIAATYKIKGSAGRGSYSKVTEVAVLKQGSIY
SITLGDNNVLNISWNSVANASGYELAGAVSEKGTYTTLQTSGATSFTHSNLVQGTTYYYK
VRAYKDLSNGIRMYGPWSAVKAKAAAHEIMGTSSVTVDQMVSYYNKRYTFPADTYRDKGA
DSAEAFFKILKEEAEAEGVRADVLFAQVMLETGGLQFGGDVQPSQCNFGGLGAVGGGAAG
ETFADVRTGLRAQVQHLKAYASTDGLNNACVDKRFQYVSRGTARYVEWLAIPQNPYGKGW
AADADYGTKLLRIMDSL
NT seq
4374 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaaggattttagcagtaatcatggcagtctgcgtgagtatgacagcactgcct
gcagatgtacgtgcagcagaagacagtgcagttcagacagaaagcacgcagaaaacatca
ccgtcagagaaatcagcccagacagaaaacactgggaatgcagcagaagagctgactgga
acggagatggcagagacagaagaagcagctgaaacggaagaaacagcagagacagaagaa
acgaccgagacggtaacaatcgaaacagagacgattgagacagaagagccggcagagaca
gaaacttcggaaacagagaaaccggcagagacagaaacaatcgaaacagaaactacggaa
accggggagccgactgagaccgaaacaggaactacagaaacggaagagccgaccgaaaca
ggaactacagaaacggaagagccgaccgaaacggagactgcggagacagagactgtccag
gcagcagaacttaactacatgatggtagagtcaccgtacgttgagacaccgggaacgcag
aatgtggtcttaagtcttggaacaggcgatgagcagctttcggatatcgtcttaaattat
aagaatctgaccaccggaaaaatctatcaggtcaaagcagccggaacagaagaagatatg
atccgttttaccatggatttttctgaaaatggacaggcaggagagtatcagatcacttcc
gtgcagtttacacaggagaaaacaaaacaggaaatcctgctatcagaccttggcatggat
gtaagatttggtgtcaatgaacaggcagagacgaacccggatcaggtactttatgatgaa
gatgcctatgcggatgtggatgctgatgttgttactatgagcgcagatggagaagttatt
tccgaaaacactgtggaaaatgtgctggagcagggaatctcagaggctgtcgccagtgtt
gcagataacttaaaaggtgcgaacagtaatgtgaaagtcgtactcgatccgggacatgat
ggcacccatgcaggagcatccggttttggagtacaggaagcggatctgacacttaagatc
gccacatattgtaaagaagaattatctacctataatggtattactgtttatatgacaaga
gagagtgcaagctgtccggcaggcggcggagattatattgcatgtctggatgcccgtgca
aaccttgcaaagaatgtgggggcaaatgtgttagtaagtttccatttaaatactgcaaac
ggaacagcgagaggtgtggaagtttattatccgaacagcaactataatgcacaggtagga
agcaatggacaggcacttgcaaagaaaatatgcgataaattggcagcacttggattgaat
tatcgtggaactttgattagaaatgcatcttatgataaatatccggatggttctgcagca
gattattacggtctgatccgtcgttgtaaaaataatggcattcctggtctgatcatcgag
catgcctttttggacaatgcaaatgattattatacatatttaagttctgatgaaaaatta
aaggcactcggtgttgcggatgcaactgcgatcgcagagtatttcggtctgacaaaagga
gcaaagaccgtaacgctcaattacacgcagtcgagagcggatggtagtcttagattaaaa
tggacaggtctcgataatgtcgattattatgaaatttatcgtaatactgtgaatgataca
aactatcctaagattgacgaagtatcggatgctacatcttatattgatgataccgtaaag
gcagggacaaaatattactatctggtccgtccggtatttaacgatggaactgcaggagag
tattctaaacccatctcaggtgtggcattaggaaaaacaaacctcacaaagatcaaggca
aagagtggaaagaagattaccctgacctggaaaaaggtttctaaagcagagggatatctg
atctatcgtcaggacagcagtgacagtaaattttatcagattggcacggtaaaatccggc
agtacactcacttacacagatactgtaaaatccaataacaaaacatatacctacaaagta
caggcttacaatacaaacaatggcagacagggtgtcggtgcatattcttccacaaaatct
gcaaagacacttgcaaaagcaaaaattacaggaatcacatcctcggatgaggaagtatta
aaaatttcctggaataaggtaagcggtgcaaagggatatatcatttcccgcagcacaaag
aaagatagtggttatagtgaaatagatacagtatcaggagaaaagacaacatcctacaca
gatgatactgtaaaagcaggaaagacctattactataaggtcgaagcatataatgtcaac
agcggtacaaaaggatacggcggtgcatcagacgcggtggcaggaaaaactgcaaaacgt
acaaagatcacttcgatcgtttccacaaatgaaaagaccttgacgatcaagtggaataag
atcacaggagcttatggttatcgcatcaaacgaagtaccgatgaagatggtacttacaaa
gttgttaagacgattaaatccggaaacacgaccagctacaaagacaccagtgtaaaagca
ggaaagacctattattacacagttgaaacgatggtaaagacaggagacaatatctgttat
agcggtgattcagcgtccatggaaggaagaacagcgaaaaaagcgaagatcaagtatgct
gtttcaaatggaagtaatcagattgaagtaaactggggagcagtgagcggtgcctacggc
taccggatcaaacgcagtacgtcaaagaatggtacttataaagtggttgccactttaaaa
ggaaaaaataatacgacctatcaggataaaaagttaaaaactgcaaagacctactattat
aagatagagacgatcaacaaggtaaatggcaaaaaaggatacagcggtaattcggcagct
gtgtcggcaaagactttgaaaactacatccattacagcagtaaaggcaaccggaagtact
tccgtaagactggaatggaaagctgtggatggggcatccggttatcagatttaccggagt
acgtcaaaagacagtggttataaaaaggtcggacaggtcaaaggtaaaaatacgaaaaaa
tatgaggataaaacattagaagccggaaaaacttactattatcaggttcgtgcatataag
agcaacagtgctaaaaacggtgtggcatctttctcaaaagcacagaaggcatggacgatc
aaacaggtggtattctcccagatcacaagtaacagcaaaaatcaggtcacacttggctgg
aagaaagtttcaaaagcacaggggtatgatatttaccggagcgacgagtcaaacagtgga
tttgaaaagatcgcttcaatttcatccggatctacactgacttacacggataagggcgta
aagagcggcaatacgtattactataaaattgcagcaacttataagatcaaaggcagtgca
ggcagaggaagttatagtaaggtaacagaggttgcagtcttaaaacagggaagtatttat
tctatcacactcggagataataatgtattaaatatctcatggaacagtgttgcaaatgca
agtggctatgaacttgccggtgcggtcagcgaaaaaggaacttataccacattacagact
tctggtgcaacatcctttacacacagtaatctggtacagggaacgacatattactataaa
gtaagagcatacaaagatttaagcaacggaatccgtatgtacggaccatggtcagcggta
aaagcaaaagctgcagcgcatgagatcatgggtacaagcagtgtgacagtcgaccagatg
gtatcttactataataaacgttataccttcccggcagatacttaccgtgataagggagca
gattctgcggaggcattctttaagatcttaaaagaagaggcagaagccgagggtgtaaga
gcagatgtattatttgcacaggttatgttagagaccggaggattacaattcggcggtgat
gtgcagccgagtcagtgtaactttggaggactcggtgcagtcggtggcggtgcagcaggt
gagacttttgcagatgtaagaaccggactccgtgcgcaggtacagcacttaaaagcatac
gcaagtacagatggattaaacaatgcatgtgtggataagcgtttccagtatgtatcgcgt
ggaacagccagatatgtcgaatggcttgcaattccacagaatccgtatggaaaaggctgg
gcagcagatgcggattatggtacgaagctgcttcggatcatggatagtttataa
DBGET
integrated database retrieval system
