Roseburia intestinalis M50/1: ROI_06470
Help
Entry
ROI_06470 CDS
T02598
Name
(GenBank) ABC-type sugar transport system, periplasmic component
KO
K17318
putative aldouronate transport system substrate-binding protein
Organism
rim
Roseburia intestinalis M50/1
Pathway
rim02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rim00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
ROI_06470
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rim02000
]
ROI_06470
Transporters [BR:
rim02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Putative aldouronate transporter
ROI_06470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3502
SBP_bac_1
HTH_56
Motif
Other DBs
NCBI-ProteinID:
CBL07905
LinkDB
All DBs
Position
630926..632434
Genome browser
AA seq
502 aa
AA seq
DB search
MKKRILAAMLTLSMVVSMTACGNSEAGGSKDSAKNNGNGDEPYTVTMVLNGSTQPDEERI
EQKINEILEPELNANLDIVVLPWASASQQLQLMLSGDEKIDVFYTQATNAVQYMNAGQIV
DMSELIDKYGTNIKQIYGEDIAKINQVEGFVYGVPNQIERGSIPAIFMRKDLVEKYNIDT
TQIKEPKDLESVFETVKAGEPDMTMLYSSSENDAPATRLFRGDTLSDNNYLGVLMDQTNS
TKLENFFATDWFKDTTTMLHNWYQKGYISQDAGTNTENWRTVCKAGNLFSLFFSYHPGTP
VEFESSTGYDFEIVPFYNEPIINSSSYNGVTFSIAQNSENPEKTMEVLDYIYGSSEIMNL
LNWGEQDKDYVIEDADNGIINFPEGITSDNAGYNLNLGWELPNQFIAYKWTGSDPQLWEK
MEEFNGSAKSSKAVGFLFDSSNCSSEIAALSNIVKQYSGALYSGSGDPDELIPELLEALD
DAGINEVIQAKQEQLDAFLAAK
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaagaattctagcagctatgcttactttgtctatggttgtgtccatgacagca
tgcggaaattcagaagcaggaggatcaaaggattcagctaaaaataacggtaatggggat
gaaccatatacagttaccatggttctgaatggaagcacacagccggatgaagaaagaatc
gaacaaaaaatcaatgagattcttgaaccggaacttaatgcgaatcttgatattgttgtg
ctgccgtgggcaagtgcaagccagcagttacagcttatgttatcaggggatgaaaaaatt
gatgtcttttatacccaggcaaccaatgcagtgcagtatatgaatgcaggacagattgta
gacatgtctgaactgattgataaatatggaacaaatatcaaacagatttatggagaggat
atagctaagatcaatcaggtcgaaggctttgtatatggcgtgccaaatcagattgaacga
ggaagtattcctgccatatttatgagaaaagatctggtggaaaagtacaatattgataca
acacagattaaagaaccaaaagatctggaaagtgtttttgagacagtaaaagcgggagag
ccggatatgacaatgttatattcgagcagtgagaatgatgcaccggctacaagattattc
cgtggagatactctgtcagataacaattatcttggtgtactcatggatcagacgaacagc
acaaaattagaaaacttctttgcgacggactggtttaaagatacaactaccatgctgcat
aactggtatcagaagggatatatcagccaggatgcaggaactaacacagagaactggaga
acagtatgcaaggctggaaatttattttcactgtttttttcttatcatcctggaacaccg
gtagaatttgaaagctccaccggctatgattttgagatcgtgccattttataacgaaccg
atcataaatagctcatcctataatggtgttacattctcaattgcccagaattcagaaaat
ccggagaaaacaatggaagtactggattatatctacggaagttcagagatcatgaatctt
ttaaactggggtgaacaggataaagactatgtgatagaagatgctgataatggcattatc
aatttcccggaaggaatcacttctgataatgcaggctataacttaaaccttggatgggaa
ttgccaaatcagtttattgcttataaatggactggttcagatccgcaattatgggaaaaa
atggaagaatttaacggttctgcaaagagctccaaagcagtaggatttttatttgacagc
agtaattgttcaagtgagatcgcagctctttccaatattgtaaaacaatacagcggagca
ctttacagcggttccggagatccagatgaacttattccggaattgttagaagcattagat
gatgcgggaatcaatgaagtgatccaggcaaaacaggaacagttagatgcttttcttgca
gcaaaataa
DBGET
integrated database retrieval system
