Roseburia intestinalis M50/1: ROI_06670
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Entry
ROI_06670 CDS
T02598
Name
(GenBank) ABC-type oligopeptide transport system, periplasmic component
KO
K15580
oligopeptide transport system substrate-binding protein
Organism
rim
Roseburia intestinalis M50/1
Pathway
rim01501
beta-Lactam resistance
rim02010
ABC transporters
rim02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rim00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
ROI_06670
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ROI_06670
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
ROI_06670
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rim02000
]
ROI_06670
Transporters [BR:
rim02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Oligopeptide transporter
ROI_06670
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
CBL07920
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Position
652542..654257
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AA seq
571 aa
AA seq
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MKKTKAVLAILMAGTMMLGLAGCGGNSSSATQGTTAGTETGSAAGDAAGTDAAASASDMN
VMLETPVESLDPQQATDGTSFEVIADYTDGLMQMDADGQAVPAIAESYDLSDDGLTYTFH
LRTDAKWSNGTPVTAADFVFGWQRAVDPDVASEYAYMLSDIGQIKNAAEIIAGEKDKSEL
GVTAVDDNTLQVELNVPVSYFTSLMYFPTFYPVNEEFFTSCGDTFATSPETVLSNGAFVL
DSYQPAATAFHLTKNADYYDTDRVKLSGLSYQVIQDSQQALMSYQTGALDTTLVNGEQVD
QVKDDPEFTTVGAGYLWYVSPNMNSVPELANLNIRLAMTMAIDRDSITADVLKDGSASTY
TAVPMQFAAGPDGSDFSEDQTKFSDVCAYDTAKAADYWAKGLEELGESEITLDMVVDADD
APQKVAQVLKEQWETALPGLTVNLVVEPKKQRVEDMQNGNFQLGLTRWGPDYADPMTYLG
MWVTDNSNNYGLWSNADYDAIIDECTTGDLCTDAEGRWARLYDAEKIVMDEAVIYPLYTQ
CNAEMLSSKVTGVEYHPVAINRVYKDAVKTE
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaaccaaagcagttttggctattttgatggccggaacaatgatgcttggtctt
gcaggctgtggcgggaacagttcttctgcaacacagggaacaaccgcaggcacagagaca
ggcagtgcagcaggtgatgctgcaggaacagatgccgcagcaagcgcatcagacatgaat
gttatgcttgaaactccggtcgagtcactcgatccgcagcaggctaccgacggaacatcc
tttgaggtaatcgctgattacaccgacggtctgatgcagatggatgcagacggacaggca
gttccggcaatcgcagaaagctatgatttatcagacgatggtttaacttatacattccat
cttcgtaccgatgcaaaatggagcaacggcacaccggttaccgcagcagatttcgtattc
ggatggcagagagctgttgatccagatgtcgcatcagagtatgcatatatgttaagcgat
atcggtcagattaaaaatgcagcagagatcatcgcaggtgagaaagacaagagtgaactt
ggtgtgacagcagtagacgacaatacacttcaggttgaactgaatgtaccagtcagctat
ttcacttctctgatgtatttcccgactttctatccggtaaatgaggagttctttacttcc
tgtggagatacatttgcaacaagtcctgagacagtattatcaaacggtgcatttgtgctg
gattcttatcagccggcagcaactgcattccatttaacaaaaaatgcagactactatgat
accgacagagtaaaactttccggattaagttatcaggtaatccaggattcacagcaggca
ttaatgagctaccagacaggagcgcttgatacaacattagtaaacggtgagcaggttgat
caggtaaaagatgatcctgaattcacaaccgttggtgccggttacttatggtatgtcagc
ccgaatatgaattctgttcctgaactcgcaaacttaaatatccgtcttgcaatgacaatg
gcaatcgaccgtgattccatcacagcagatgtattaaaagatggttctgcttctacatac
acagcagttccaatgcagttcgcagcaggtccggacggatctgacttctccgaagatcag
acaaaattctctgatgtatgtgcttatgatactgcaaaagcagcagattactgggcaaaa
ggtttagaggaacttggtgaatctgagatcactttagacatggtagtagatgcagatgac
gcacctcagaaagtagcgcaggtattaaaagagcagtgggagacagctcttccgggactg
accgtaaacctggttgttgagccgaagaaacagcgtgtggaagacatgcagaacggtaac
ttccagttaggtttaacacgttggggaccggactacgcagatccaatgacatatcttgga
atgtgggtaacagataactctaacaactacggtctgtggagcaacgcagattacgatgca
atcattgatgagtgtacaaccggtgatctttgcacagatgcagagggacgctgggcaaga
ctttacgatgctgagaagatcgttatggatgaggcagttatttatccgctttacacacag
tgcaacgcagagatgctttcttctaaagtaacaggcgttgagtatcatccggtagctatc
aaccgtgtatacaaagatgctgtaaagactgaataa
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