Roseburia intestinalis M50/1: ROI_08430
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Entry
ROI_08430 CDS
T02598
Name
(GenBank) Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
KO
K04771
serine protease Do [EC:
3.4.21.107
]
Organism
rim
Roseburia intestinalis M50/1
Pathway
rim01503
Cationic antimicrobial peptide (CAMP) resistance
rim02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
rim00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
ROI_08430
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
ROI_08430
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rim01002
]
ROI_08430
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
rim03110
]
ROI_08430
Enzymes [BR:
rim01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.107 peptidase Do
ROI_08430
Peptidases and inhibitors [BR:
rim01002
]
Serine peptidases
Family S1: chymotrypsin family
ROI_08430
Chaperones and folding catalysts [BR:
rim03110
]
Other chaperones and cochaperones
DegP / HtrA
ROI_08430
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Trypsin_2
Trypsin
PDZ_2
PDZ_6
PDZ
PDZ_Tricorn
PDZ_1
Motif
Other DBs
NCBI-ProteinID:
CBL08076
LinkDB
All DBs
Position
847175..848713
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AA seq
512 aa
AA seq
DB search
MDGNNYNNNNQNGSSDSFYSYNNGSQSNQQTEHANEGNVNQYNNSYQNTNSYSQNAGYQQ
GSAYQNGTYQNTGYQQNGAYQNGGYQNTNGAFYQNAQTTGKKQKKKRERKPGGFGTKLAK
CAAIALVFGLVSGTAFEGVHLVSSKAFGNDETAVSDSGSQNALTKADNKVEATSTSSNYV
ATDVSDIVSSVMPSIVAITNVSETEYQSFWGGMPQTYESTSCGSGIIVSQDDNYLYVATN
NHVVNGANSLTVTFNDESTVSAEVKGTVPSTDLAVIRVALSSIESDTMNNIKVATLGDSD
SLKVGNSCIAIGNALGYGQSVTVGYISALNRQVSVSDSESDTSYTADLIQTDAAINPGNS
GGALLSANGEVIGINSVKYSDTSVEGIGYAIPINTAAPIINDLITKEKVDESDSAYLGIV
GVDVTDDVAKTYNMPSGVYVAQVTGGSAAEQAGIQKGDIITEFDGKQIGSMEELSSTMEY
YKAGTTVDVKIERSTNGEYQEQTISVTLGKKN
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atggatggtaacaattataacaacaacaatcagaatgggtcttcggattccttctattca
tacaataacggcagccagagcaatcagcagacagaacatgcaaatgaaggaaacgtaaac
cagtacaacaattcttatcagaacacaaattcttattcacaaaacgcaggatatcagcag
ggcagtgcatatcagaatggcacataccagaacacaggatatcagcagaacggtgcttac
cagaatggtggatatcagaataccaacggtgcattttatcagaacgcacagacgactggt
aaaaaacaaaagaaaaagagagaaagaaaaccgggtggatttggaacgaaacttgcaaaa
tgcgcagccatcgcgttagtctttggactggtatcaggcactgcatttgagggtgtacat
cttgtatcgtccaaggcatttggcaatgatgaaaccgcagtatcagacagcggcagtcag
aatgcactgaccaaagcagacaacaaggtggaggcaacttccacatcgtcgaattatgta
gcaacggatgtatctgacatcgtatcatccgtaatgccgtccatcgtggcaatcacaaat
gtgagcgagaccgaataccagagtttctggggcggtatgccacagacttatgagagcaca
agctgtggatccggtatcatcgtaagtcaggatgataattatctttatgttgcaacgaat
aatcacgtagtaaacggtgcaaacagtctgacagttacatttaatgatgagtcaacagtc
agcgcagaggtaaaaggaacagttccttctacggatcttgcagtcatccgtgtagcgtta
agcagcattgaaagtgatacgatgaataatattaaagtagccacacttggtgattctgac
agcttaaaagttggtaattcctgtatcgcaatcggtaacgcacttggttatggacagtct
gtaaccgttggttatatcagtgcattgaaccgtcaggtatctgtcagtgattcagagagt
gacacaagctatactgcagatctgatccagacagatgcagcaatcaaccctggtaacagt
ggtggtgcattactcagtgcaaacggtgaggttatcggtatcaactctgtaaaatattcc
gatacttccgtagagggtattggatatgcaatcccgatcaatacggcagcaccgattatc
aatgatctgatcacgaaagaaaaagtagatgagtctgacagcgcataccttggtatcgta
ggtgtcgatgtaacagatgatgttgcaaaaacttataacatgccatccggtgtttatgtt
gcacaggtaaccggaggttccgcagcagagcaggcaggtatccagaaaggtgatatcatc
acagagtttgacggaaaacagattggttccatggaagaactttcatctacaatggagtat
tataaagcaggtacaacggttgatgtgaagattgagcgttctacgaatggtgaatatcag
gagcagacgatttccgttacacttggcaagaaaaattaa
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