Roseburia intestinalis M50/1: ROI_09160
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Entry
ROI_09160 CDS
T02598
Name
(GenBank) (p)ppGpp synthetase, RelA/SpoT family
KO
K01139
GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:
2.7.6.5
3.1.7.2
]
Organism
rim
Roseburia intestinalis M50/1
Pathway
rim00230
Purine metabolism
rim01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rim00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
ROI_09160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rim03009
]
ROI_09160
Enzymes [BR:
rim01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.6 Diphosphotransferases
2.7.6.5 GTP diphosphokinase
ROI_09160
3. Hydrolases
3.1 Acting on ester bonds
3.1.7 Diphosphoric-monoester hydrolases
3.1.7.2 guanosine-3',5'-bis(diphosphate) 3'-diphosphatase
ROI_09160
Ribosome biogenesis [BR:
rim03009
]
Prokaryotic type
Other maturation factors
ROI_09160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD_4
RelA_SpoT
TGS
ACT_4
RelA_AH_RIS
HD
ACT
ACT_AHAS_ss
ThiS
Ub-Mut7C
Glyoxalase_8
UreF
Motif
Other DBs
NCBI-ProteinID:
CBL08134
LinkDB
All DBs
Position
918817..921129
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AA seq
770 aa
AA seq
DB search
MADFSSESLDLQKKVKEEDDNIKPMKEFESPEKLYDELIASVRKYHPSTDISLIEKAYHV
ARDAHEGQARKSGEPYIIHPLCVAIILAELELDKETIVAGLLHDVVEDTVMTDEQIAQEF
GDEVALLVDGVTKLGQLSYDADKVEVQAENLRKMFLAMAKDIRVILIKLADRLHNMRTLK
YMTPEKQKEKARETMDIYAPIAQRLGISKIKIELDDLSLKYLEPDAYYDLVHQIAQRKSV
RDEYVQKLVEEVRQHIKDAGIPAQVDGRAKHFFSIYKKMVNQHKTLDQIYDLFAIRIIVD
SVKDCYAALGVIHEMYKPIPGRFKDYIAMPKPNMYQSLHTTLIGPTGQPFEIQIRTFEMH
RTAEYGIAAHWKYKEASNNGGVSQPMTVTEEEKLSWLRQILEWQRDMSDNKEFMSLLKSD
LDLFSDTVFCFTPTGDVKNLPTGSTPIDFAYSIHSAVGNKMIGAKVNGKLVPIDYIIQNG
DRVEVITSQNSKGPSRDWLNIVKSTQAKNKINQWFRSELKEENITHGKELLIASAKSKGI
NFPDINKPEYQEKILRKYGFHDWNSCLATIGHGGLKEGQIVNRMYEEYKKDHLARITDDE
VLETIAENKDKVVQKHSKSGIIVKGLYDVAVHFSKCCSPVPGDEIVGFVTRGRGVSIHRT
DCINIINLSDMERERLIDAEWQHDEESGSSGLYRAEIKIYGNNRTGLLVDITKVFTEREI
DIDSIHSKTSKQGIATIDVSFSTKGREELTSVVERLRQIESIIDIERTTG
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atggcggatttttcatcagaatcactggatctgcaaaaaaaagtaaaagaagaggacgat
aacatcaagccgatgaaagagtttgagagtccggaaaaactatatgacgaactgatcgcc
agcgtgcgaaagtatcatccatcgacagatatatcgctgatcgagaaagcatatcatgtt
gcgagggatgcacatgagggacaggcaagaaagtccggcgagccatatatcatccatcca
ttgtgtgttgcgattattttagcggagttagagctggataaggagacgatcgttgcagga
cttttacatgatgttgtggaagatactgttatgacggatgaacagattgcacaggagttt
ggagatgaggttgctcttctggtagatggtgttaccaaattaggacagctctcttatgat
gcggataaagtggaggttcaggcagagaatcttcgtaagatgttccttgcaatggcaaag
gatatccgtgttatcctgatcaagcttgcggatcgtcttcacaatatgcgtacgctcaaa
tacatgacacctgagaagcagaaggaaaaagcgcgtgaaacgatggatatttacgcacca
atcgcacagcgtcttggtatttccaagatcaagatcgagctggacgatctctcactcaag
tatttagagccggatgcctattatgatctggtacatcagatcgcacagcgcaagagtgtc
agggacgaatatgtacagaaactggtggaagaagtgcgtcagcacatcaaagatgcagga
attcctgcacaggttgacggacgtgcaaaacatttcttcagtatttacaaaaaaatggtc
aatcagcacaagacattagaccagatttatgatctgtttgccatccgcatcatcgtggat
tccgtcaaggactgttatgcagcactcggtgtgattcatgagatgtataagccgattccg
ggacggtttaaagactacattgcgatgcctaagccgaacatgtaccagtcactccatacg
actctgatcggaccgaccggtcagccgtttgagatacagatccgtacctttgagatgcat
cgtacggctgaatatggtatcgctgcccattggaagtacaaagaggcaagtaacaatggc
ggtgtgtcacagccaatgaccgttaccgaagaggaaaagctgagctggctccgtcagatc
ttagagtggcagcgcgacatgtcagataataaagagttcatgagcctgctaaagagcgat
cttgacctgttttccgatacggtattctgttttacaccgaccggagatgtcaagaatctt
ccgaccggttccacgccgatcgactttgcttacagtattcattccgcggtcggcaataag
atgatcggtgcaaaagtcaacggaaaactggttccaatcgactacatcatccagaacggt
gaccgtgtggaagtaatcacttcccagaattcaaagggaccgagccgtgactggttaaat
attgtaaagagcacccaggcgaaaaataagatcaatcagtggttccgcagtgagttaaaa
gaagaaaatattacacacggcaaggaacttttgatcgcatcggcaaaatccaagggaatc
aatttcccggatatcaataagccggaatatcaggagaaaattttaagaaaatatggtttc
catgactggaattcctgccttgcaacgatcggacatggtggtttaaaagaaggtcagatt
gtaaaccgcatgtatgaggaatacaaaaaagaccatcttgcgcgtatcacggatgatgaa
gtgcttgagaccattgccgagaataaagataaggtcgtacagaaacattccaagagcggt
atcattgtaaaaggactttatgatgtggcagtgcatttttcaaagtgctgcagtccggta
ccgggagacgagatcgttggatttgtaaccagaggccgaggtgtttccatccatagaaca
gactgtatcaacattatcaatctgtctgatatggagcgtgagcgtctgatcgatgccgag
tggcagcatgatgaagagtccggcagcagtggcctgtaccgtgcagagatcaagatctac
ggcaataaccgaaccggtcttctcgtggatatcacaaaggtatttacagagcgtgagatc
gatattgattcgattcactccaaaacaagcaagcagggaattgcaacaatcgatgtatct
ttcagcacgaagggcagggaagaacttacaagcgttgtggagagactgcggcagatcgag
agtatcattgatatagagagaacgacgggctaa
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