Roseburia intestinalis M50/1: ROI_09750
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Entry
ROI_09750 CDS
T02598
Name
(GenBank) Site-specific recombinase XerD
KO
K14059
integrase
Organism
rim
Roseburia intestinalis M50/1
Brite
KEGG Orthology (KO) [BR:
rim00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
ROI_09750
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GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_3
Phage_int_SAM_4
Motif
Other DBs
NCBI-ProteinID:
CBL08183
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Position
complement(967256..968551)
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AA seq
431 aa
AA seq
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MAKGSVRKKGKKWYYRFYVEDASGNLVQKEYAGTESKSETEKLLRQAMDDYESKKFIAKS
ENITIGELLDIWAEEELKTGTLSNGTVQNYLGAITNIKKHPISERKLKNVTSEHLQAFFD
LLSFGGTYPDGSERKGYSKDYIRSFSAVLQQSFRFAVSPKQYITFNPMQYIKLKYQTDEV
DLFSDDDMDGDIQPIPREDYERLIEFLQDYNPPAILPIQIAYYAGLRIGEACGLAWQDVN
LEEQCLTIRRSIRYDGSRHKNIIGPTKRKKVRIVDFGDTLAEILRNARKEQLKNRMQYGE
LYHKNYYREVKDKNRVYYEFYHLDGTENVPEDYKEISFVCLRPDGSLELPSTLGIVCRKI
AQKLDGFEGFHFHQLRHTYTSNLLANGAAPKDVQELLGHSDVSTTMNVYAHSTRKAKRES
AKLLDKVAGND
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaggatctgtaagaaaaaaaggaaagaaatggtactaccgcttctatgtagaa
gatgcaagcggcaatctggttcagaaagaatacgctggaacagaaagtaaaagtgaaacg
gaaaaactgctccgtcaggcaatggacgattacgaaagcaagaaattcattgcaaagtcg
gaaaatattacaattggagaattacttgatatatgggcagaggaagaattaaagaccggt
acgctcagtaatgggacagtccagaattacctcggtgccattaccaacatcaagaagcat
ccaatttcagagagaaagttgaaaaatgtaacatctgagcatttacaagccttcttcgat
ctgctttcctttggtggcacttatccagatggttcagaaagaaaaggttatagcaaagat
tacattcgttctttctcggcagtattacagcagtcattccgatttgcagtatcaccaaag
caatatatcactttcaatccgatgcagtatattaagctgaaataccagacggatgaggtt
gacctgttttctgatgatgacatggatggcgatatacagccaattccacgagaggattat
gaaagactgattgaatttctacaggattacaatccaccggcaatacttccaatccagata
gcttattatgcaggacttcgtatcggtgaagcctgtggtctggcatggcaggatgtaaat
cttgaagaacagtgccttacaatcagacgaagtatccgatatgatggttcaaggcacaag
aatatcatcggaccaaccaaacgaaaaaaggtaaggattgttgattttggagatacactg
gcagagattcttcgcaatgcccgaaaggaacaacttaaaaaccgaatgcagtacggagaa
ctttaccacaaaaactactacagagaagtaaaagacaaaaacagagtttactatgagttc
tatcatctggatggaacagagaatgttccagaagattataaggaaatatcctttgtctgc
ttaagaccggatggaagtttggaactgccaagcacgttaggaattgtttgcaggaagatt
gctcagaaactggatggatttgaaggatttcattttcaccagttgcgacacacctacaca
agcaaccttctggcaaatggagcagctccgaaagatgtacaggaactgttaggacactca
gatgtcagtaccacaatgaatgtctacgcccattccacaagaaaagccaagcgggaatcc
gcaaagttacttgataaagtggcaggcaacgactaa
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