Roseburia intestinalis M50/1: ROI_11310
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Entry
ROI_11310 CDS
T02598
Name
(GenBank) transcriptional regulator, CdaR family
KO
K02647
carbohydrate diacid regulator
Organism
rim
Roseburia intestinalis M50/1
Brite
KEGG Orthology (KO) [BR:
rim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rim03000
]
ROI_11310
Transcription factors [BR:
rim03000
]
Prokaryotic type
Helix-turn-helix
Other families
ROI_11310
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_30
GGDEF_2
HTH_8
GcrA
DUF6181
HTH_1
Motif
Other DBs
NCBI-ProteinID:
CBL08312
LinkDB
All DBs
Position
1131323..1132417
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AA seq
364 aa
AA seq
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MISNHKIQTALDEIKDISRIDLALYTEKGKPVAATFEPEGDLEGAITSFADSMAESQMLS
GYHFFKVIADGEIEYILLTKSQAEDAYMVGRLAVCQIRNLAAAYMEQFDRNNFMQNILLG
NMLVVDMYNKAQKLHIEQAERVVYVIDLEDKKDSTAVELVKNLFATKMRDYVTEVDEQSI
VLIKDVRDVKNEDELQKLADMIVDNMHTEAMVRVRVGYGNQVNNLPDIAKSYQEAKMALE
VGKIFYAEKETIAYRYLGIGRLIYQLPMSLCEMFIHEVFGDEIPDIFNEEITTTIQKFFE
NNLNISETARQLYVHRNTLVYRLERLEKIIGLDIRKFDDAMTFKLALMVISHMRYARRQD
TDQR
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgatttcaaaccataaaatacagacagcacttgatgagataaaggatatatcgagaatt
gatcttgcactttacacggaaaaaggaaagccggttgcagcaacatttgagccggaggga
gatttagaaggtgcaatcacatcttttgcagattccatggctgagagccagatgctctca
ggatatcatttttttaaggtgatcgctgatggagagatagaatatattctgctgaccaaa
tcacaggcagaggatgcttatatggtgggacgccttgcagtctgccagatcagaaacctt
gcggctgcctatatggagcagtttgaccgcaacaatttcatgcagaatatcctgcttgga
aatatgttggtcgtagatatgtacaataaggcgcagaaacttcatatcgagcaggcggag
cgtgtggtttatgtgatcgatttagaagataagaaagattccaccgcagtggagcttgtg
aaaaatctctttgcaaccaagatgcgtgattatgtgacagaagtggacgagcagagcatc
gtcctgatcaaggatgttcgcgacgtgaagaatgaagatgaattacagaagttagccgat
atgattgtggacaatatgcataccgaggcaatggtgcgcgtgagggtcggctacggcaat
caggtgaataatctgccggatattgcaaaatcctatcaggaggcaaaaatggctcttgag
gttggaaagattttttatgcggaaaaagaaacgatcgcataccggtatcttggcatcgga
cgtctgatttaccagcttccgatgagcctttgcgagatgtttattcatgaggtgtttggg
gatgagatcccggatatttttaatgaagagataacgacaacgattcagaagttttttgaa
aacaatctgaacatttcagagacagccagacagctttatgtgcacagaaatactttagtg
taccgtctggagcgattagagaaaatcattggacttgatatccgtaaatttgacgatgcg
atgacgtttaaacttgcactgatggttatttctcatatgcggtatgcgagacgtcaggat
acggatcagagatag
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