Roseburia intestinalis M50/1: ROI_13230
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Entry
ROI_13230 CDS
T02598
Name
(GenBank) glycyl-tRNA synthetase, dimeric type
KO
K01880
glycyl-tRNA synthetase [EC:
6.1.1.14
]
Organism
rim
Roseburia intestinalis M50/1
Pathway
rim00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rim00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
ROI_13230
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rim01007
]
ROI_13230
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rim03016
]
ROI_13230
03029 Mitochondrial biogenesis [BR:
rim03029
]
ROI_13230
Enzymes [BR:
rim01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
ROI_13230
Amino acid related enzymes [BR:
rim01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
ROI_13230
Transfer RNA biogenesis [BR:
rim03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
ROI_13230
Mitochondrial biogenesis [BR:
rim03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
ROI_13230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HGTP_anticodon
tRNA-synt_2b
Zn-ribbon_8
Motif
Other DBs
NCBI-ProteinID:
CBL08479
UniProt:
D4KNM7
LinkDB
All DBs
Position
1318220..1319617
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AA seq
465 aa
AA seq
DB search
MEKSMDKIVALAKSRGFVYPGSEIYGGLANTWDYGNLGVELKNNVKRAWWQKFIQENPYN
VGVDCAILMNPQTWVASGHLGGFSDPLMDCKECHERFRADKIIEDFAEEKKIELKSSVDG
WTQEEMRDFIEENQVPCPTCGKHNFTDIRQFNLMFKTFQGVTEDAKNTVYLRPETAQGIF
VNFKNVQRTSRKKIPFGIGQVGKSFRNEITPGNFTFRTREFEQMELEFFCEPGTDLEWFQ
YWRGFCRDWLISLGIKEDEMRLRDHDPAELAFYSKGTTDIEFLFPFGWGELWGIADRTDY
DLGRHQETSGQDLTYFDDEKNERYLPYVIEPSLGADRVVLAFLCAAYDEENIGTEEKPDM
RTVLHFHPALAPVKIGVLPLSKKLNEGAEKVFAQLSHKYNCEFDDRGNIGKRYRRQDEIG
TPFCVTYDFESENDGAVTVRDRDTMEQERIKIEDLDAYFAEKFNW
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaatcaatggacaaaattgtagcactggcaaaatcaagaggattcgtttatccg
ggatctgagatttacggcggtcttgcaaatacatgggattatggtaatctcggcgttgag
ttaaagaacaatgtaaaaagagcatggtggcagaaatttattcaggagaacccatacaat
gttggtgtggactgtgcgatcttaatgaacccgcagacatgggttgcatccggacatctt
ggaggattttctgatcctttaatggattgtaaagaatgtcacgagcgtttccgtgcagac
aagatcatcgaggattttgcggaagagaaaaaaattgagttaaagagttccgtagacggc
tggacacaggaagagatgcgtgatttcatcgaagaaaatcaggttccatgtccgacctgc
ggcaaacataactttacagatatccgtcagtttaacctgatgtttaagacattccagggg
gttactgaagatgcaaaaaataccgtatacttaagaccggagacagcacagggtattttc
gttaactttaaaaatgtacagagaacatcccgcaaaaagatcccgttcggtatcggacag
gtcggaaaatctttccgtaacgagatcacaccgggtaactttacattccgtaccagagag
tttgagcagatggagcttgagtttttctgtgagcctggcactgatttagagtggttccag
tactggagaggcttctgtcgtgactggctgatctcccttggaatcaaagaggatgagatg
cgtctgcgtgaccatgatccggctgaacttgcattttacagcaagggaacaaccgatatc
gagttcttattcccgttcggatggggcgagctctggggtatcgctgacagaactgattat
gaccttggacgccatcaggagacttccggtcaggatcttacttattttgatgatgagaag
aatgaaagatatcttccgtatgtcatcgagccttcactcggtgcagaccgtgttgtttta
gcattcttatgtgctgcttacgatgaggagaatatcggaaccgaagaaaaaccggatatg
agaacagttcttcatttccacccggctttagctccggttaagatcggtgtgcttccatta
tccaagaagttaaatgaaggcgcagaaaaggtatttgcacagctttcacacaaatacaac
tgtgaatttgatgacagaggaaatatcggaaaacgttacagaagacaggatgagatcggt
actccgttctgcgtaacttacgatttcgaatctgaaaatgacggtgcggtaacggttcgt
gatcgtgataccatggagcaggagcgtattaagatcgaggatctggatgcttatttcgca
gagaagtttaattggtag
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