Roseburia intestinalis M50/1: ROI_13600
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Entry
ROI_13600 CDS
T02598
Name
(GenBank) Site-specific recombinases, DNA invertase Pin homologs
KO
K06400
site-specific DNA recombinase
Organism
rim
Roseburia intestinalis M50/1
Brite
KEGG Orthology (KO) [BR:
rim00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99978 Cell growth
ROI_13600
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Gene cluster
GFIT
Motif
Pfam:
Resolvase
Recombinase
Zn_ribbon_recom
SPG4
SHOCT
UFD1_N2
UPF0172
SH3_12
Gag_p6
Motif
Other DBs
NCBI-ProteinID:
CBL08511
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Position
complement(1363737..1365110)
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AA seq
457 aa
AA seq
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MKKKELCPAVIRVALYIRVSGEEQKIKGLSLEAQQERLETYAKEHGWIITGTYIDAAKTA
RKNLHKRTEFQRMMESVKRNEVDILLFARLDRWFRSVADYYKVMEILQAHNCNWKTTDEE
YDTTTANGRLYINVKLSIAQNEADIDGERIDVVFDSKIAHGTVVSGSCPYGFRVNNEKRL
EIIPDDAAIVQDAFCYFESSVSQRATTKYIREKYGINWCYATFHRMLTEELYTGVYNRGG
RYNANFCPSIINRDQFDRVQALLKKNVHTAPSGRIYLFTSILVCDECSHKLNGYLSQGIV
YYRCAQHMQRGRCIHNHSIREDYVEQWLFDHLSEEFNRVKLDWEIQAAKRKRSSSSKGKA
VLKRKLNKLKELYVNDLIDIEEYRKDYEIYTSALKQMPNDKEMEQPPNFKAVERLLQSDF
KNLYNTLTREEKRTLWRSAIKEIRIDNDYNITGIIFE
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagaaagaattatgtccggcagtgatccgggtcgcattatatatccgcgtttcc
ggagaagaacagaaaatcaaaggactttcactggaagcccagcaggaacggttagaaaca
tatgcaaaagaacacggctggatcatcaccggcacatatatagatgccgctaaaacagcc
cgcaaaaatctgcacaaaagaacagaattccagcgcatgatggaatccgtcaaacgcaac
gaagtagatatcctgctctttgccaggctcgaccgctggttccggtctgttgcagattat
tacaaagttatggagatcttacaggcccacaactgcaactggaaaacaacggatgaagaa
tatgatacaaccactgcaaacggccggctttatattaacgtaaaattatccatcgcccaa
aatgaagcagatattgacggagagcgaattgatgttgtattcgacagcaaaattgcacat
ggtaccgttgtatccggcagctgtccttacggctttcgtgtaaacaacgaaaaaagactg
gaaatcatcccagacgatgccgctattgtacaagatgcattctgctattttgaatcctcc
gtatcacaacgcgctacgacaaaatatatccgtgaaaaatacggcatcaactggtgctac
gctactttccaccggatgttaacggaagaattatataccggtgtatataaccgcggcggc
agatacaatgcgaacttctgtccatccatcatcaaccgcgatcaattcgaccgggtacag
gctcttttaaaaaagaacgttcacactgctccatccggccgcatatacctttttacttct
attcttgtctgcgacgaatgcagccataaattaaacggctatctttcccagggtatcgtt
tattaccgctgtgcacagcacatgcagcgtggcagatgtatacataatcattctatccgc
gaagattatgtggaacaatggttattcgatcacttaagcgaagaatttaaccgcgtcaag
ctcgactgggaaatacaggctgcgaaaagaaaacgttcttcctcctcgaaaggcaaagca
gtcttaaaacgaaagttaaataaactgaaggaattatatgtaaatgatctgatcgacatt
gaagagtatcgaaaagactatgagatatacacctctgccctgaagcagatgccaaacgac
aaagaaatggaacagccgccaaattttaaagctgtggaacggttactgcagtctgatttt
aaaaatttatacaacactttaacccgtgaagaaaaaagaacgttgtggagatccgctatt
aaggaaatccggattgacaacgattacaatataacgggtattatttttgaatag
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