Roseburia intestinalis M50/1: ROI_14850
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Entry
ROI_14850 CDS
T02598
Name
(GenBank) Type IV secretory pathway, VirD4 components
Organism
rim
Roseburia intestinalis M50/1
Pathway
rim03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
rim00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
ROI_14850
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Gene cluster
GFIT
Motif
Pfam:
T4SS-DNA_transf
TraG-D_C
TrwB_AAD_bind
AAA_22
Motif
Other DBs
NCBI-ProteinID:
CBL08617
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Position
1477946..1479736
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AA seq
596 aa
AA seq
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MRNDDQKTSLILTVCGILPVVWLALLTAPYVSGGLVEIIRGIPVAMGNPLEITMCEDSVK
TVLIFLLAYAMGIGVYFSTRRNYRRREEHGSAKWGNAGALNKKYRDKDPSANKLLTQNVR
IGLDGKKHRRNLNILVCGGSGAGKTRFFCKPNAMQCNTSFVILDPKGEIVRDIGGLLENK
GYEVRVLDLINMHRSHCYNPFVYLRNDNDVQRLVTNLFKATTPKGSQSQDPFWDTAASML
LLALVFYLKYEAPSDEQNFPMVMELLRAGEVREDDDSYVSPLDELFDRLEMVNPEHIALK
YYRDYHSGSAKTLKSIQITLAARLEKFNLESLAGLTATDELDLPSLGEKKVALFALIPDN
DTSFNFLVSILYTQLFQQLFYLADHKYGGSLPVHCHFIMDEFANVSLPDDFDKILSVMRS
RGVSVSIILQNLAQLKALFEKQWESIVGNCDEFLYLGGNEQSTHKYVSELLGKETIDTNT
YGKSSGRSGNYSTNYQISGRELMTPDEVRMLDNRYALLFVRGERPVMDFKYDILKHPNVK
LTADGGQPPYIHGEPTQAVATLVFDSDIPDNAVSVTAVSTSYELLSDEDLEEIFNL
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgaggaacgatgaccagaaaacgagcctaatccttactgtttgcggcatacttcctgtt
gtatggcttgccctgctgacagcaccctatgtcagcggcggtcttgtagagattatccga
ggtatacccgtggcgatgggcaatccgcttgaaataacgatgtgtgaggacagcgtaaag
actgtccttatttttttgcttgcctacgctatgggcatcggcgtttatttctctacacgc
aggaattaccgcaggcgtgaggaacacggctctgcgaaatggggcaacgcaggtgctttg
aataagaagtaccgagataaagacccgtcagctaataagctcttgacccagaatgtccgt
atcgggttggacgggaaaaagcaccgcaggaatctgaacattttagtatgtggtggctct
ggtgcgggtaaaacaaggtttttctgcaagccaaatgctatgcagtgcaacacatctttt
gtaatactcgatccaaagggcgaaatcgtccgtgacatcggcggtctgttggaaaataaa
ggctatgaggtgcgtgtacttgaccttatcaatatgcaccgcagccattgttacaatcct
tttgtctatctgcggaacgataacgatgttcagaggttggtaacaaatttgtttaaagcg
accacgccgaaaggctcacagtcgcaagacccgttctgggatacggcggcaagtatgctg
cttctggctctggtgttctatctgaaatatgaagcaccgtcagacgagcagaatttcccg
atggttatggagctgctccgtgcaggcgaagtccgagaggacgatgacagctatgtaagc
cctctggacgagctgtttgaccgtctggaaatggtaaacccagagcatatcgccctcaag
tattacagggattaccactctggtagtgcaaagaccttaaagagtatccagataaccctt
gccgcaaggcttgaaaaattcaatctggagagccttgcagggcttaccgccaccgatgag
cttgacctgccaagtctgggagaaaagaaggtcgctctgttcgctctgataccagacaac
gacacgagctttaatttccttgtcagtatcctttatacccagctctttcagcagcttttt
tatcttgcagaccacaagtacggcggaagcctgcctgtgcattgccattttataatggac
gaatttgcgaatgtttcattgcctgatgactttgataaaatcctgtctgttatgcgttcc
agaggggtatcggtatccattatcctgcaaaatctggcacagctcaaagccctttttgaa
aagcaatgggaaagcattgtcggcaactgcgatgagtttctgtatttgggcggcaacgag
caaagcacccacaaatatgtgtcagaacttttgggcaaggaaaccattgataccaacacc
tacgggaaaagctctgggcggagtggtaactattcaacaaattatcagatttcggggcgt
gagctgatgaccccagacgaagtgcgtatgcttgataaccgatacgcacttctttttgtg
cgtggagaacgccccgttatggacttcaagtatgacatcttgaagcacccgaatgtgaag
ctgacggctgacggagggcaaccgccgtatatccacggagagcctacgcaggctgtcgca
actcttgtgtttgacagtgatattccagataacgccgtgagcgtgacagctgtcagcact
tcctatgagcttctgtccgatgaggacttggaagaaatattcaatttataa
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