Roseburia intestinalis M50/1: ROI_17830
Help
Entry
ROI_17830 CDS
T02598
Name
(GenBank) ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component
KO
K02031
peptide/nickel transport system ATP-binding protein
Organism
rim
Roseburia intestinalis M50/1
Pathway
rim02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rim00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ROI_17830
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rim02000
]
ROI_17830
Transporters [BR:
rim02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
ROI_17830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
SMC_N
AAA_21
AAA_22
ABC_ATPase
TniB
FtsK_SpoIIIE
nSTAND1
NACHT
AAA_16
Motif
Other DBs
NCBI-ProteinID:
CBL08875
LinkDB
All DBs
Position
1786431..1787399
Genome browser
AA seq
322 aa
AA seq
DB search
MSKLLQVNDLTTEFTGDFGKKISVDHVSFDVAEGETVCIVGESGCGKSVTSLSIMGLLGR
GGAVVDGSVLFANKNLLDMDEKQLDTIRGNQMTMIFQDPLTSLNPVFTIGSQITESIRIH
MHLPKKEAGERAVTILEKVGMPDARAAMKKYPHMLSGGMRQRVMIAMALCCNPKLLIADE
PTTALDVTIQAQIMELIRDLQKEIGMSVILITHDIGLVAQMADRVFVMYAGQIIEMASVK
DLFYHPAHPYTKALLDTVPGIYDESGRTLASIPGIVPENYDQIPGCRFADRCAFAGEGCE
KKQEMREIEKDHFVRCHKADRS
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaattattacaggtaaatgatctgaccacagagtttaccggggattttgggaaa
aaaatcagtgtggatcatgtcagttttgatgtcgcagaaggagagacggtttgtatcgtt
ggtgagtccggctgtggcaagagtgtgacatcactgtctattatgggattattaggaagg
ggcggagctgtcgttgacggctctgtcctctttgcaaacaaaaatctgctggatatggat
gaaaaacagttagatacgatccgcggaaatcagatgacgatgatttttcaggatccttta
acatcgttaaacccggtgtttacgatcggaagccagatcacggagagcatccggattcat
atgcatctgccaaaaaaagaagcaggagagcgtgcggtcacgatcttagagaaagtcggt
atgccggatgcgcgtgctgcaatgaaaaaatatccgcatatgctttccggcggaatgcgt
cagcgagtgatgatcgcgatggcactttgctgtaatccaaaacttttgatcgcagatgag
ccgacgacggcacttgacgtgacgatccaggcgcagatcatggaactgatacgggatctg
caaaaagagattgggatgtctgtgatcctgatcacacacgatatcggacttgtggcgcag
atggcggaccgtgtgtttgtcatgtatgcgggacagatcatcgagatggcatctgtgaag
gatcttttttatcatccggcacatccgtatacgaaagcactgcttgatacggttccgggc
atttacgatgagagcggaaggacgcttgcatcgattccgggaatcgtaccggaaaattat
gaccagattccgggatgcaggtttgcggaccgctgtgcatttgccggggaaggctgtgaa
aagaagcaggagatgagggagatagaaaaggatcatttcgtgcgctgccataaggctgac
aggagttaa
DBGET
integrated database retrieval system
