Roseburia intestinalis M50/1: ROI_19580
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Entry
ROI_19580 CDS
T02598
Name
(GenBank) hypothetical protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
rim
Roseburia intestinalis M50/1
Brite
KEGG Orthology (KO) [BR:
rim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rim03400
]
ROI_19580
DNA repair and recombination proteins [BR:
rim03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ROI_19580
Archaeal homologous recombinant proteins
ROI_19580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
AAA_29
SMC_N
ABC_tran
ABC_ATPase
AAA_21
Sec10_N
AAA_22
AAA_16
Motif
Other DBs
NCBI-ProteinID:
CBL09005
UniProt:
D4KQ53
LinkDB
All DBs
Position
1970424..1972817
Genome browser
AA seq
797 aa
AA seq
DB search
MKPVSLTISAFGPYAGEQTIDFERLGSQGLFLITGDTGAGKTTIFDAITFALYGEASGDV
RKADMFRSKYAKDDVKTFVRLTFEYANKRYTVERNPEYMRPKGRGTGMTTEKANAALEYP
DDREPVTKSREVTRAITELIGLDCRQFTQIAMIAQGDFQKVLFANTEERGKIFRQIFGTD
IYRVLQDKLKDAVKKQWKEYDELRRSINQYMEGIVCESDSLDEEGTRIAEKINLLKKEKF
DGRIEEGISLLEELCKAEESALECLQKEKEALDQQIKNMDELSGKVRENADRRRLLEEKQ
QKLKDLEALLVQAKADMDRAGEEAECCEKLGRTIEEYKQKLVLFEKIQEIGLSQEKKHQD
MEEKVQKKRQDEQRRTELEGKLQQEKETLKSYEGITAEIQRIEHEMRLITEKMDTLKNQR
DRSRALEEHISDQKEKLDLKKKTENSLLEQRQLLKEEQEQNKDAAGQEIAYEKEVKEIRQ
KIQDLTEIAEQLNTSEREVKRLGTELENVQKSYEVKSRDLQQQKETWEQLSGADSRGEQA
EKAILEVSERIRRLEELENRLEDWEKVSREREKTQKQYQKAAAEQKQISEQYRRIEQQFW
DAQAGMLAQGLKEDEPCPVCGAIHHPTLAVIPQETPDREVLKQAKAEDEKERESVSRLSE
KAHQLVTQENEKMSAVLKDAGELLGEPDVRMSLNEIKTETKRQKSADEARREEYKDQKEK
AKKDLDVKHVLEEQMQSAQDELVMLNEQNINLGQMLATATERCTQQKQQWKKNVADCGTG
IEQTEDQKNCFCTAYAD
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccagtcagtcttacaataagtgcatttggcccgtatgcgggggagcagaccata
gattttgaacggcttggatcgcagggattatttctgatcacaggggataccggggcagga
aagaccacgatctttgatgcaatcacgtttgcgctgtacggggaagccagtggtgatgtg
cgcaaagcggatatgttccgcagcaaatatgcaaaagatgacgtgaaaacattcgtgcgt
ctgacatttgagtacgcaaataaacggtatacagtagagcgtaacccggaatatatgcgt
ccgaagggacgtggaacgggaatgacaacggaaaaggcgaatgctgcactagagtacccg
gatgacagagaaccagtgacaaaaagcagggaggtcacacgcgccatcacagagctgatc
ggtttagactgcagacagtttacccagatagcaatgatcgcacagggggattttcagaaa
gtattgtttgccaatacggaggagagaggaaagatttttcgtcagatattcgggacggat
atttatcgtgtgctgcaggacaaactgaaagatgccgtaaaaaaacagtggaaagaatat
gatgaactgcggcgcagcatcaatcagtatatggagggaattgtctgtgagagtgactct
ctggatgaagaagggacaaggatcgcagaaaaaataaatcttttaaaaaaggaaaaattt
gacggcaggatcgaggagggaatctcacttttagaagaactttgtaaagcggaagaatct
gcgttggagtgcctgcaaaaggaaaaagaggcgctggatcagcaaataaaaaatatggat
gaacttagcgggaaagtgcgtgaaaatgcagacagaaggcggttgttggaagaaaaacag
cagaagctgaaggacttagaagcgcttctggtgcaggcaaaagcggatatggacagggca
ggagaggaagcggaatgctgtgaaaaattaggcagaacgattgaagaatataaacagaag
ctggtgttgtttgaaaaaatacaggaaattggtctgtcgcaggaaaagaagcaccaggat
atggaagaaaaggttcagaaaaaacggcaggatgaacagagacgaacagaactggaggga
aaactgcagcaggaaaaagagaccttaaaatcttatgagggcattactgcggaaatacaa
cgcatagagcatgaaatgcgactgatcacagaaaaaatggatacgctgaaaaatcagaga
gacaggagccgtgcgctggaggagcatatttcagatcaaaaggaaaaacttgatttaaaa
aagaaaacagaaaacagtcttttagaacagcggcaactgttaaaagaagaacaggagcag
aacaaggatgcggcaggacaggagattgcctatgagaaggaagtaaaagaaatccgacag
aaaatacaggatctgacagagattgcagaacagttgaacacatcagaaagagaagtaaag
agacttggtacagaactggaaaacgtacagaaatcatatgaggtaaaaagcagggattta
cagcagcaaaaagaaacgtgggagcagctttccggtgcagacagcaggggagaacaggca
gagaaagcaatattggaagtatcagagaggatacgcaggctcgaagagctggaaaacagg
ttagaggattgggagaaagtcagcagagaaagggagaaaactcaaaaacagtatcagaaa
gcagccgcagagcagaaacagatcagtgaacaataccggaggatagaacagcaattctgg
gatgcacaggcgggaatgctggcgcagggattaaaggaagacgaaccctgtccggtctgt
ggagccatacatcatccgacactggcagtcataccacaggaaactccggatcgggaagtg
ttaaaacaggcaaaagcggaggatgaaaaggaaagggagtcagtcagcagactgagtgaa
aaagcgcatcagctcgtgacacaggaaaatgagaaaatgtcagcagtcctaaaggatgca
ggagaactgcttggtgagcctgatgtcagaatgtctttaaatgaaataaagacggagaca
aaaaggcaaaagagtgctgatgaggcgagaagggaagaatataaagatcagaaagaaaaa
gcgaaaaaggatctggatgtcaagcatgtattagaagaacagatgcagtctgcgcaggat
gaactggttatgttaaacgaacagaacattaatcttggacagatgcttgccacggcgaca
gaacggtgcacacagcagaaacagcagtggaagaaaaacgttgcagactgtggaactggc
atagagcagacagaggatcaaaaaaactgtttttgcacagcttatgcagattga
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