Roseburia intestinalis M50/1: ROI_19600
Help
Entry
ROI_19600 CDS
T02598
Name
(GenBank) pyridoxal-phosphate dependent TrpB-like enzyme
KO
K06001
tryptophan synthase beta chain [EC:
4.2.1.20
]
Organism
rim
Roseburia intestinalis M50/1
Pathway
rim00260
Glycine, serine and threonine metabolism
rim00400
Phenylalanine, tyrosine and tryptophan biosynthesis
rim01100
Metabolic pathways
rim01110
Biosynthesis of secondary metabolites
rim01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
rim00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
ROI_19600
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
ROI_19600
Enzymes [BR:
rim01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.20 tryptophan synthase
ROI_19600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PALP
Motif
Other DBs
NCBI-ProteinID:
CBL09007
LinkDB
All DBs
Position
1974519..1975892
Genome browser
AA seq
457 aa
AA seq
DB search
MSEKKIPYKIYLEENEMPTQWYNVRADMKNKPAPLLNPATLKPMTAEELGHVFCDELVKQ
ELDDTNPYIDIPQEIRDFYRMYRPSPLVRAYCLEKKLGTPAKIYYKFEGNNTSGSHKLNS
AIAQAYYAKKQGLKGVTTETGAGQWGTALSMACAYFDLDCKVYMVKVSYEQKPFRREVMR
TYGASVTPSPSETTEVGRKILAEHPGTTGSLGCAISEAVEAATTREGYRYVLGSVLNQVL
LHQSVIGLETKAALEKYDITPDIIIGCAGGGSNLGGLISPFMGEKLRGEKDYQFIAVEPA
SCPSLTRGRYAYDFCDTGRVCPLAKMYTLGSGFIPSANHAGGLRYHGMSSTLSQLYDDGL
MEARSVEQTSVFEAAEQFARIEGILPAPESSHAIRVAIDEALKCKETGEEKTIVFGLTGT
GYFDMVAYEKFNNGEMTDYIPTDEELAVGFAGLPKVE
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaaagaaaataccgtataaaatttatctggaagagaatgagatgccgacacaa
tggtacaatgtgcgcgctgatatgaagaacaaaccagcaccgcttttgaacccggcaact
ctaaaaccgatgaccgcggaggaactggggcatgtattctgtgatgaactggtaaaacag
gaactcgatgataccaacccatacatcgatattccacaggagatccgtgatttttaccgc
atgtaccgtccgtcaccactggtgagagcatattgtctggaaaaaaaactggggactccg
gcaaagatctactataaatttgagggaaacaatacaagtggaagccataaattaaactct
gcgattgcacaggcatattatgcaaagaagcagggattaaaaggtgtgacaacagagaca
ggtgctggacagtggggaactgcactttctatggcgtgtgcttattttgatcttgactgt
aaagtctatatggtaaaagtttcctatgaacagaaaccattccgccgtgaggtaatgcgc
acatatggagcaagtgtaaccccgtcaccgtctgagacaacagaagtcggcagaaagatt
ttagcagagcatccgggcacaacaggaagtcttggctgtgcaatctccgaggcagtagaa
gctgcaacgacgagagaaggatatcgttatgtattgggaagtgtgttaaaccaggtatta
ctacatcagtcagtcattggacttgagacaaaagctgctctggaaaagtatgatattacg
ccggatatcattatcggatgtgcaggcggcggttccaatcttgggggtctgatctctccg
tttatgggagaaaagctgcgtggtgaaaaagactatcaatttatcgcagtcgaaccggca
tcctgtccgagtcttacgagaggccgctatgcatatgatttctgtgataccggaagggtc
tgtccgttagcaaagatgtatacacttggcagcggatttattccatctgcaaaccatgcc
ggaggacttcgctatcacggcatgagttcaactctgtcacagctttatgatgacggactg
atggaggcaaggagtgtagagcagacttctgtatttgaagcagcagagcagtttgcaaga
atagagggaatccttccggcaccggagagttctcatgcgattcgtgttgccattgacgag
gcgttgaaatgtaaagaaaccggagaagaaaagactatcgtttttggacttaccggaacc
ggctattttgatatggttgcatatgagaagtttaacaatggagagatgacagactatatt
ccgaccgatgaagagcttgcagtgggatttgcagggctgccgaaggtggagtaa
DBGET
integrated database retrieval system
